NPs Basic Information

Name
Efomycin G
Molecular Formula C53H86O18
IUPAC Name*
(3E,5E,7S,8S,11E,13E,15S,16S)-8-[(2S,3R,4S)-4-[(2R,4R,5R,6R)-4-[(2S,4S,5S,6S)-4,5-dihydroxy-6-methyloxan-2-yl]oxy-5-ethyl-2-hydroxy-6-methyloxan-2-yl]-3-hydroxypentan-2-yl]-16-[(2S,3R,4S)-4-[(2R,4R,5R,6R)-4-[(2R,4S,5S,6S)-4,5-dihydroxy-6-methyloxan-2-yl]oxy-2-hydroxy-5,6-dimethyloxan-2-yl]-3-hydroxypentan-2-yl]-7,15-dimethyl-1,9-dioxacyclohexadeca-3,5,11,13-tetraene-2,10-dione
SMILES
CC[C@@H]1[C@H](O[C@](C[C@H]1O[C@@H]2C[C@@H]([C@@H]([C@@H](O2)C)O)O)([C@@H](C)[C@@H]([C@H](C)[C@@H]3[C@H](/C=C/C=C/C(=O)O[C@@H]([C@H](/C=C/C=C/C(=O)O3)C)[C@@H](C)[C@H]([C@H](C)[C@]4(C[C@H]([C@@H]([C@H](O4)C)C)O[C@H]5C[C@@H]([C@@H]([C@@H](O5)C)O)O)O)O)C)O)O)C
InChI
InChI=1S/C53H86O18/c1-13-37-34(10)71-53(63,25-41(37)67-45-23-39(55)49(61)36(12)65-45)32(8)47(59)30(6)51-27(3)19-15-17-20-42(56)68-50(26(2)18-14-16-21-43(57)69-51)29(5)46(58)31(7)52(62)24-40(28(4)33(9)70-52)66-44-22-38(54)48(60)35(11)64-44/h14-21,26-41,44-51,54-55,58-63H,13,22-25H2,1-12H3/b18-14+,19-15+,20-17+,21-16+/t26-,27-,28+,29-,30-,31-,32-,33+,34+,35-,36-,37+,38-,39-,40+,41+,44-,45+,46+,47+,48+,49+,50-,51-,52+,53+/m0/s1
InChIKey
SGWODLSBUBNJEQ-FRRLYSMZSA-N
Synonyms
Efomycin G
CAS NA
PubChem CID 100957855
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Macrolides and analogues
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Macrolides and analogues

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 1011.2 ALogp: 6.7
HBD: 8 HBA: 18
Rotatable Bonds: 13 Lipinski's rule of five: Rejected
Polar Surface Area: 270.0 Aromatic Rings: 5
Heavy Atoms: 71 QED Weighted: 0.119

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.618 MDCK Permeability: 0.00032675
Pgp-inhibitor: 0.999 Pgp-substrate: 0.997
Human Intestinal Absorption (HIA): 0.594 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.326

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.001 Plasma Protein Binding (PPB): 88.92%
Volume Distribution (VD): 0.601 Fu: 7.69%

ADMET: Metabolism

CYP1A2-inhibitor: 0.001 CYP1A2-substrate: 0.061
CYP2C19-inhibitor: 0.005 CYP2C19-substrate: 0.891
CYP2C9-inhibitor: 0.001 CYP2C9-substrate: 0.009
CYP2D6-inhibitor: 0 CYP2D6-substrate: 0.035
CYP3A4-inhibitor: 0.305 CYP3A4-substrate: 0.882

ADMET: Excretion

Clearance (CL): 3.246 Half-life (T1/2): 0.096

ADMET: Toxicity

hERG Blockers: 0.682 Human Hepatotoxicity (H-HT): 0.482
Drug-inuced Liver Injury (DILI): 0.095 AMES Toxicity: 0.162
Rat Oral Acute Toxicity: 0.093 Maximum Recommended Daily Dose: 0.976
Skin Sensitization: 0.935 Carcinogencity: 0.089
Eye Corrosion: 0.003 Eye Irritation: 0.006
Respiratory Toxicity: 0.98
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002304 0.365 D09YHJ 0.335
ENC003639 0.323 D06EPF 0.332
ENC003877 0.310 D03KTD 0.312
ENC004223 0.309 D0Q6OS 0.310
ENC003727 0.309 D02DWM 0.305
ENC004292 0.305 D08XAC 0.305
ENC001551 0.305 D0F5OR 0.305
ENC003730 0.299 D02YIZ 0.301
ENC003236 0.298 D02FEM 0.300
ENC003621 0.296 D02OZE 0.293
*Note: the compound similarity was calculated by RDKIT.