NPs Basic Information

Name
Lobophorin F
Molecular Formula C54H78N2O17
IUPAC Name*
methyl N-[(2S,3S,4R,6R)-6-[[(3S,6S,13R,16R,17R,18R,20R,21S,22R)-17-[(2S,4R,5S,6S)-4-[(2R,4R,5R,6S)-4,5-dihydroxy-6-methyloxan-2-yl]oxy-5-hydroxy-6-methyloxan-2-yl]oxy-23-hydroxy-3,4,8,12,18,20,22-heptamethyl-25,27-dioxo-26-oxapentacyclo[22.2.1.01,6.013,22.016,21]heptacosa-4,7,11,14,23-pentaen-9-yl]oxy]-2,4-dimethyl-4-nitrooxan-3-yl]carbamate
SMILES
C[C@@H]1C[C@H]([C@H]([C@H]2[C@H]1[C@@]3([C@H](C=C2)C(=CCC(C(=C[C@@H]4C=C([C@H](CC45C(=O)C(=C3O)C(=O)O5)C)C)C)O[C@H]6C[C@@]([C@@H]([C@@H](O6)C)NC(=O)OC)(C)[N+](=O)[O-])C)C)O[C@@H]7C[C@H]([C@H]([C@@H](O7)C)O)O[C@@H]8C[C@H]([C@H]([C@@H](O8)C)O)O)C
InChI
InChI=1S/C54H78N2O17/c1-24-13-16-37(70-41-23-52(10,56(64)65)47(32(9)69-41)55-51(63)66-12)26(3)19-33-18-25(2)29(6)22-54(33)49(61)42(50(62)73-54)48(60)53(11)35(24)15-14-34-43(53)27(4)17-28(5)46(34)72-40-21-38(45(59)31(8)68-40)71-39-20-36(57)44(58)30(7)67-39/h13-15,18-19,27-41,43-47,57-60H,16-17,20-23H2,1-12H3,(H,55,63)/t27-,28-,29+,30+,31+,32+,33+,34-,35-,36-,37?,38-,39-,40-,41+,43+,44+,45+,46-,47-,52-,53+,54?/m1/s1
InChIKey
MVMHAFZCUXRAAA-TZKIJQPBSA-N
Synonyms
Lobophorin F
CAS NA
PubChem CID 139584897
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesterterpenoids
          • Direct Parent: Sesterterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 1027.2 ALogp: 5.8
HBD: 5 HBA: 17
Rotatable Bonds: 8 Lipinski's rule of five: Rejected
Polar Surface Area: 264.0 Aromatic Rings: 8
Heavy Atoms: 73 QED Weighted: 0.06

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.365 MDCK Permeability: 0.00025095
Pgp-inhibitor: 1 Pgp-substrate: 1
Human Intestinal Absorption (HIA): 0.142 20% Bioavailability (F20%): 0.012
30% Bioavailability (F30%): 0.257

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.005 Plasma Protein Binding (PPB): 82.60%
Volume Distribution (VD): 1.27 Fu: 9.34%

ADMET: Metabolism

CYP1A2-inhibitor: 0 CYP1A2-substrate: 0.811
CYP2C19-inhibitor: 0.037 CYP2C19-substrate: 0.631
CYP2C9-inhibitor: 0.069 CYP2C9-substrate: 0.002
CYP2D6-inhibitor: 0.002 CYP2D6-substrate: 0.05
CYP3A4-inhibitor: 0.94 CYP3A4-substrate: 0.919

ADMET: Excretion

Clearance (CL): 10.474 Half-life (T1/2): 0.044

ADMET: Toxicity

hERG Blockers: 0.194 Human Hepatotoxicity (H-HT): 0.986
Drug-inuced Liver Injury (DILI): 0.987 AMES Toxicity: 0.896
Rat Oral Acute Toxicity: 0.959 Maximum Recommended Daily Dose: 0.961
Skin Sensitization: 0.144 Carcinogencity: 0.031
Eye Corrosion: 0.003 Eye Irritation: 0.005
Respiratory Toxicity: 0.977
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003730 0.843 D06EPF 0.369
ENC003621 0.794 D03KTD 0.365
ENC003727 0.730 D09YHJ 0.360
ENC004292 0.730 D0L4SD 0.335
ENC004223 0.730 D0V3GA 0.332
ENC003877 0.721 D0F5OR 0.331
ENC004293 0.716 D0Q6OS 0.326
ENC003236 0.713 D01UBX 0.317
ENC004294 0.708 D0TG7I 0.315
ENC003260 0.600 D02OZE 0.315
*Note: the compound similarity was calculated by RDKIT.