NPs Basic Information

Name
Pyranonigrin S
Molecular Formula C10H9NO4
IUPAC Name*
3-hydroxy-2-[(E)-prop-1-enyl]-6,7-dihydropyrano[2,3-c]pyrrole-4,5-dione
SMILES
C/C=C/C1=C(C(=O)C2=C(O1)CNC2=O)O
InChI
InChI=1S/C10H9NO4/c1-2-3-5-8(12)9(13)7-6(15-5)4-11-10(7)14/h2-3,12H,4H2,1H3,(H,11,14)/b3-2+
InChIKey
CBJUACYAKSDFBO-NSCUHMNNSA-N
Synonyms
Pyranonigrin S; SCHEMBL21638075; 3-hydroxy-2-[(E)-prop-1-enyl]-6,7-dihydropyrano[2,3-c]pyrrole-4,5-dione; 947331-69-3
CAS NA
PubChem CID 16756787
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 207.18 ALogp: 0.1
HBD: 2 HBA: 4
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 75.6 Aromatic Rings: 2
Heavy Atoms: 15 QED Weighted: 0.72

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.866 MDCK Permeability: 0.00001290
Pgp-inhibitor: 0.004 Pgp-substrate: 0.042
Human Intestinal Absorption (HIA): 0.021 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.215

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.034 Plasma Protein Binding (PPB): 87.05%
Volume Distribution (VD): 0.843 Fu: 15.30%

ADMET: Metabolism

CYP1A2-inhibitor: 0.752 CYP1A2-substrate: 0.837
CYP2C19-inhibitor: 0.1 CYP2C19-substrate: 0.064
CYP2C9-inhibitor: 0.235 CYP2C9-substrate: 0.894
CYP2D6-inhibitor: 0.368 CYP2D6-substrate: 0.636
CYP3A4-inhibitor: 0.07 CYP3A4-substrate: 0.098

ADMET: Excretion

Clearance (CL): 4.864 Half-life (T1/2): 0.918

ADMET: Toxicity

hERG Blockers: 0.007 Human Hepatotoxicity (H-HT): 0.9
Drug-inuced Liver Injury (DILI): 0.978 AMES Toxicity: 0.035
Rat Oral Acute Toxicity: 0.887 Maximum Recommended Daily Dose: 0.455
Skin Sensitization: 0.69 Carcinogencity: 0.516
Eye Corrosion: 0.094 Eye Irritation: 0.645
Respiratory Toxicity: 0.307
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002384 0.585 D0YX4S 0.186
ENC001753 0.299 D07UXP 0.175
ENC006074 0.288 D0R0BX 0.173
ENC004404 0.269 D0YH0N 0.169
ENC003039 0.267 D00EEL 0.167
ENC003354 0.266 D0I8DD 0.165
ENC002932 0.254 D0E3OF 0.165
ENC003316 0.254 D09EBS 0.165
ENC003951 0.250 D0V9WF 0.162
ENC004982 0.250 D0G5UB 0.161
*Note: the compound similarity was calculated by RDKIT.