NPs Basic Information

Name
Erythro cis-4,5-Dimethyl-2-undecene
Molecular Formula C13H26
IUPAC Name*
(Z)-4,5-dimethylundec-2-ene
SMILES
CCCCCCC(C)C(C)/C=C\C
InChI
InChI=1S/C13H26/c1-5-7-8-9-11-13(4)12(3)10-6-2/h6,10,12-13H,5,7-9,11H2,1-4H3/b10-6-
InChIKey
JFRZNLXQCUNNNB-POHAHGRESA-N
Synonyms
(2Z)-4,5-Dimethyl-2-undecene #; Erythro cis-4,5-Dimethyl-2-undecene; 2-Undecene, 4,5-dimethyl-, [R*,S*-(Z)]-
CAS NA
PubChem CID 5364969
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Unsaturated hydrocarbons
        • Subclass: Unsaturated aliphatic hyd
          • Direct Parent: Unsaturated aliphatic hyd

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 182.35 ALogp: 5.9
HBD: 0 HBA: 0
Rotatable Bonds: 7 Lipinski's rule of five: Rejected
Polar Surface Area: 0.0 Aromatic Rings: 0
Heavy Atoms: 13 QED Weighted: 0.374

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.429 MDCK Permeability: 0.00001210
Pgp-inhibitor: 0.001 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.013 20% Bioavailability (F20%): 0.806
30% Bioavailability (F30%): 0.987

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.911 Plasma Protein Binding (PPB): 97.20%
Volume Distribution (VD): 3.497 Fu: 4.20%

ADMET: Metabolism

CYP1A2-inhibitor: 0.821 CYP1A2-substrate: 0.898
CYP2C19-inhibitor: 0.362 CYP2C19-substrate: 0.905
CYP2C9-inhibitor: 0.474 CYP2C9-substrate: 0.819
CYP2D6-inhibitor: 0.071 CYP2D6-substrate: 0.374
CYP3A4-inhibitor: 0.578 CYP3A4-substrate: 0.329

ADMET: Excretion

Clearance (CL): 7.115 Half-life (T1/2): 0.481

ADMET: Toxicity

hERG Blockers: 0.024 Human Hepatotoxicity (H-HT): 0.113
Drug-inuced Liver Injury (DILI): 0.349 AMES Toxicity: 0.027
Rat Oral Acute Toxicity: 0.056 Maximum Recommended Daily Dose: 0.034
Skin Sensitization: 0.333 Carcinogencity: 0.046
Eye Corrosion: 0.876 Eye Irritation: 0.988
Respiratory Toxicity: 0.143
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001144 0.523 D01QLH 0.239
ENC000459 0.512 D0I4DQ 0.238
ENC000583 0.489 D0ZI4H 0.226
ENC001131 0.489 D0N3NO 0.225
ENC000554 0.476 D06FEA 0.224
ENC001158 0.468 D0AY9Q 0.222
ENC001241 0.460 D0V0IX 0.221
ENC001156 0.460 D0T9TJ 0.220
ENC001150 0.458 D0H2YX 0.216
ENC000558 0.447 D05ATI 0.206
*Note: the compound similarity was calculated by RDKIT.