NPs Basic Information

Name
3-Methylnonane
Molecular Formula C10H22
IUPAC Name*
3-methylnonane
SMILES
CCCCCCC(C)CC
InChI
InChI=1S/C10H22/c1-4-6-7-8-9-10(3)5-2/h10H,4-9H2,1-3H3
InChIKey
PLZDDPSCZHRBOY-UHFFFAOYSA-N
Synonyms
3-METHYLNONANE; 5911-04-6; Nonane, 3-methyl-; 3-methyl nonane; 3-mrthylnonane; 3-methyl-nonane; 3-Methylnonane, (DL)-; DTXSID70863649; EINECS 227-631-6; LMFA11000617; MFCD00027308; 3-Methylnonane, >=99.0% (GC); AKOS024319124; DB-053320; CS-0453989; FT-0635903; M0282; T72672; Q2815998
CAS 5911-04-6
PubChem CID 22202
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Saturated hydrocarbons
        • Subclass: Alkanes
          • Direct Parent: Branched alkanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 142.28 ALogp: 5.3
HBD: 0 HBA: 0
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 0.0 Aromatic Rings: 0
Heavy Atoms: 10 QED Weighted: 0.474

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.316 MDCK Permeability: 0.00001280
Pgp-inhibitor: 0.002 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.002 20% Bioavailability (F20%): 0.775
30% Bioavailability (F30%): 0.966

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.805 Plasma Protein Binding (PPB): 96.49%
Volume Distribution (VD): 2.757 Fu: 3.03%

ADMET: Metabolism

CYP1A2-inhibitor: 0.956 CYP1A2-substrate: 0.604
CYP2C19-inhibitor: 0.553 CYP2C19-substrate: 0.699
CYP2C9-inhibitor: 0.51 CYP2C9-substrate: 0.818
CYP2D6-inhibitor: 0.082 CYP2D6-substrate: 0.08
CYP3A4-inhibitor: 0.093 CYP3A4-substrate: 0.143

ADMET: Excretion

Clearance (CL): 7.2 Half-life (T1/2): 0.213

ADMET: Toxicity

hERG Blockers: 0.045 Human Hepatotoxicity (H-HT): 0.015
Drug-inuced Liver Injury (DILI): 0.079 AMES Toxicity: 0.007
Rat Oral Acute Toxicity: 0.047 Maximum Recommended Daily Dose: 0.025
Skin Sensitization: 0.754 Carcinogencity: 0.06
Eye Corrosion: 0.992 Eye Irritation: 0.98
Respiratory Toxicity: 0.506
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000797 0.900 D01QLH 0.289
ENC000519 0.727 D0AY9Q 0.278
ENC001131 0.722 D0Y3KG 0.262
ENC000850 0.692 D05ATI 0.254
ENC000580 0.688 D02MLW 0.253
ENC000769 0.676 D0G2KD 0.236
ENC001148 0.667 D0ZI4H 0.233
ENC001144 0.639 D0N3NO 0.232
ENC000459 0.636 D0I4DQ 0.231
ENC001154 0.629 D08SJZ 0.230
*Note: the compound similarity was calculated by RDKIT.