NPs Basic Information

Name
2,3,5-Trimethyldecane
Molecular Formula C13H28
IUPAC Name*
2,3,5-trimethyldecane
SMILES
CCCCCC(C)CC(C)C(C)C
InChI
InChI=1S/C13H28/c1-6-7-8-9-12(4)10-13(5)11(2)3/h11-13H,6-10H2,1-5H3
InChIKey
AQDNBRMRIRTYIA-UHFFFAOYSA-N
Synonyms
2,3,5-Trimethyldecane; 62238-11-3; Decane, 2,3,5-trimethyl-; 2,3,5-Trimethyl-decane; 2,3,5-Trimethyldecane #; DTXSID0058647; LMFA11000675
CAS 62238-11-3
PubChem CID 522039
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Saturated hydrocarbons
        • Subclass: Alkanes
          • Direct Parent: Branched alkanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 184.36 ALogp: 6.4
HBD: 0 HBA: 0
Rotatable Bonds: 7 Lipinski's rule of five: Rejected
Polar Surface Area: 0.0 Aromatic Rings: 0
Heavy Atoms: 13 QED Weighted: 0.473

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.358 MDCK Permeability: 0.00000996
Pgp-inhibitor: 0.008 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.003 20% Bioavailability (F20%): 0.779
30% Bioavailability (F30%): 0.938

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.578 Plasma Protein Binding (PPB): 97.69%
Volume Distribution (VD): 2.689 Fu: 2.53%

ADMET: Metabolism

CYP1A2-inhibitor: 0.642 CYP1A2-substrate: 0.752
CYP2C19-inhibitor: 0.423 CYP2C19-substrate: 0.908
CYP2C9-inhibitor: 0.487 CYP2C9-substrate: 0.714
CYP2D6-inhibitor: 0.026 CYP2D6-substrate: 0.065
CYP3A4-inhibitor: 0.349 CYP3A4-substrate: 0.312

ADMET: Excretion

Clearance (CL): 9.492 Half-life (T1/2): 0.116

ADMET: Toxicity

hERG Blockers: 0.023 Human Hepatotoxicity (H-HT): 0.017
Drug-inuced Liver Injury (DILI): 0.235 AMES Toxicity: 0.005
Rat Oral Acute Toxicity: 0.027 Maximum Recommended Daily Dose: 0.015
Skin Sensitization: 0.496 Carcinogencity: 0.042
Eye Corrosion: 0.988 Eye Irritation: 0.987
Respiratory Toxicity: 0.102
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001144 0.650 D01QLH 0.244
ENC001207 0.619 D0ZI4H 0.228
ENC000583 0.605 D0N3NO 0.227
ENC001131 0.568 D00FSV 0.214
ENC001156 0.565 D0T9TJ 0.211
ENC001241 0.532 D0Y3KG 0.200
ENC001174 0.500 D0X4FM 0.198
ENC000769 0.500 D0B2OT 0.196
ENC001132 0.500 D0K3ZR 0.195
ENC000581 0.500 D00WUF 0.192
*Note: the compound similarity was calculated by RDKIT.