NPs Basic Information

Name
3-Hydroxytridecanoic acid
Molecular Formula C13H26O3
IUPAC Name*
3-hydroxytridecanoic acid
SMILES
CCCCCCCCCCC(CC(=O)O)O
InChI
InChI=1S/C13H26O3/c1-2-3-4-5-6-7-8-9-10-12(14)11-13(15)16/h12,14H,2-11H2,1H3,(H,15,16)
InChIKey
CWSNHZHHWHLJIM-UHFFFAOYSA-N
Synonyms
3-hydroxytridecanoic acid; 32602-69-0; 3-hydroxy-tridecanoic acid; 3-HYDROXYTRIDECANOICACID; Tridecanoic acid, 3-hydroxy-; SCHEMBL310749; DTXSID10954328; CHEBI:177435; 3-OH-i-13:0; LMFA01050172; MFCD00210305; AKOS027380550; 13:0(3-OH)
CAS 32602-69-0
PubChem CID 5312749
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty acids and conjugate
          • Direct Parent: Long-chain fatty acids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 230.34 ALogp: 4.1
HBD: 2 HBA: 3
Rotatable Bonds: 11 Lipinski's rule of five: Accepted
Polar Surface Area: 57.5 Aromatic Rings: 0
Heavy Atoms: 16 QED Weighted: 0.525

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.978 MDCK Permeability: 0.00003590
Pgp-inhibitor: 0.01 Pgp-substrate: 0.008
Human Intestinal Absorption (HIA): 0.018 20% Bioavailability (F20%): 0.928
30% Bioavailability (F30%): 0.959

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.801 Plasma Protein Binding (PPB): 93.56%
Volume Distribution (VD): 0.287 Fu: 4.67%

ADMET: Metabolism

CYP1A2-inhibitor: 0.044 CYP1A2-substrate: 0.407
CYP2C19-inhibitor: 0.028 CYP2C19-substrate: 0.65
CYP2C9-inhibitor: 0.128 CYP2C9-substrate: 0.978
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.08
CYP3A4-inhibitor: 0.008 CYP3A4-substrate: 0.039

ADMET: Excretion

Clearance (CL): 7.874 Half-life (T1/2): 0.786

ADMET: Toxicity

hERG Blockers: 0.018 Human Hepatotoxicity (H-HT): 0.057
Drug-inuced Liver Injury (DILI): 0.024 AMES Toxicity: 0.008
Rat Oral Acute Toxicity: 0.015 Maximum Recommended Daily Dose: 0.096
Skin Sensitization: 0.555 Carcinogencity: 0.1
Eye Corrosion: 0.965 Eye Irritation: 0.986
Respiratory Toxicity: 0.296
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002092 0.830 D0XN8C 0.451
ENC003362 0.714 D0O1PH 0.447
ENC000972 0.709 D05ATI 0.444
ENC001313 0.709 D0I4DQ 0.430
ENC002101 0.678 D0Z5BC 0.429
ENC000270 0.667 D07ILQ 0.425
ENC000102 0.660 D0P1RL 0.420
ENC000088 0.604 D0D9NY 0.408
ENC000378 0.589 D0Z5SM 0.400
ENC001377 0.587 D0E4WR 0.386
*Note: the compound similarity was calculated by RDKIT.