NPs Basic Information

Name
5-Hydroxy-2,4-dimethylpentanoic acid, methyl ester
Molecular Formula C8H16O3
IUPAC Name*
methyl 5-hydroxy-2,4-dimethylpentanoate
SMILES
CC(CC(C)C(=O)OC)CO
InChI
InChI=1S/C8H16O3/c1-6(5-9)4-7(2)8(10)11-3/h6-7,9H,4-5H2,1-3H3
InChIKey
RGHYZUWIQIJUJU-UHFFFAOYSA-N
Synonyms
5-Hydroxy-2,4-dimethylpentanoic acid, methyl ester; Methyl 5-hydroxy-2,4-dimethylpentanoate #
CAS NA
PubChem CID 560308
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty acid esters
          • Direct Parent: Fatty acid esters

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 160.21 ALogp: 1.1
HBD: 1 HBA: 3
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 46.5 Aromatic Rings: 0
Heavy Atoms: 11 QED Weighted: 0.629

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.337 MDCK Permeability: 0.00024649
Pgp-inhibitor: 0 Pgp-substrate: 0.003
Human Intestinal Absorption (HIA): 0.005 20% Bioavailability (F20%): 0.005
30% Bioavailability (F30%): 0.033

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.964 Plasma Protein Binding (PPB): 15.95%
Volume Distribution (VD): 0.904 Fu: 83.07%

ADMET: Metabolism

CYP1A2-inhibitor: 0.266 CYP1A2-substrate: 0.598
CYP2C19-inhibitor: 0.041 CYP2C19-substrate: 0.851
CYP2C9-inhibitor: 0.008 CYP2C9-substrate: 0.263
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.336
CYP3A4-inhibitor: 0.02 CYP3A4-substrate: 0.277

ADMET: Excretion

Clearance (CL): 8.982 Half-life (T1/2): 0.829

ADMET: Toxicity

hERG Blockers: 0.013 Human Hepatotoxicity (H-HT): 0.268
Drug-inuced Liver Injury (DILI): 0.29 AMES Toxicity: 0.008
Rat Oral Acute Toxicity: 0.027 Maximum Recommended Daily Dose: 0.017
Skin Sensitization: 0.603 Carcinogencity: 0.043
Eye Corrosion: 0.384 Eye Irritation: 0.962
Respiratory Toxicity: 0.081
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000382 0.452 D00WUF 0.302
ENC003040 0.388 D0ZK8H 0.263
ENC001138 0.378 D03XTC 0.229
ENC000819 0.366 D04MWJ 0.222
ENC000307 0.344 D07ZTO 0.222
ENC001474 0.344 D0G8SQ 0.222
ENC000186 0.333 D02UDJ 0.216
ENC001137 0.333 D0R1QE 0.214
ENC000833 0.326 D0U0OT 0.214
ENC000780 0.325 D0KD1U 0.212
*Note: the compound similarity was calculated by RDKIT.