NPs Basic Information

Name
5-(3-Hydroxypropyl)pyrrolidin-2-one
Molecular Formula C7H13NO2
IUPAC Name*
5-(3-hydroxypropyl)pyrrolidin-2-one
SMILES
C1CC(=O)NC1CCCO
InChI
InChI=1S/C7H13NO2/c9-5-1-2-6-3-4-7(10)8-6/h6,9H,1-5H2,(H,8,10)
InChIKey
CJGLHMSXEHVWKR-UHFFFAOYSA-N
Synonyms
5-(3-hydroxypropyl)pyrrolidin-2-one; 80243-73-8; Pyrrolidin-5-one, 2-[3-hydroxypropyl]-; AKOS006354599; 5-(3-Hydroxypropyl)-2-pyrrolidinone #; DA-38695; Pyrrolidine-5-one, 2-[3-hydroxypropyl]-; F2147-7988
CAS NA
PubChem CID 558386
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrrolidines
        • Subclass: Pyrrolidones
          • Direct Parent: Pyrrolidine-2-ones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 143.18 ALogp: -0.3
HBD: 2 HBA: 2
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 49.3 Aromatic Rings: 1
Heavy Atoms: 10 QED Weighted: 0.602

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.508 MDCK Permeability: 0.00023318
Pgp-inhibitor: 0.021 Pgp-substrate: 0.032
Human Intestinal Absorption (HIA): 0.044 20% Bioavailability (F20%): 0.013
30% Bioavailability (F30%): 0.183

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.97 Plasma Protein Binding (PPB): 9.13%
Volume Distribution (VD): 0.732 Fu: 84.39%

ADMET: Metabolism

CYP1A2-inhibitor: 0.026 CYP1A2-substrate: 0.239
CYP2C19-inhibitor: 0.028 CYP2C19-substrate: 0.186
CYP2C9-inhibitor: 0.012 CYP2C9-substrate: 0.323
CYP2D6-inhibitor: 0.004 CYP2D6-substrate: 0.136
CYP3A4-inhibitor: 0.009 CYP3A4-substrate: 0.212

ADMET: Excretion

Clearance (CL): 6.72 Half-life (T1/2): 0.801

ADMET: Toxicity

hERG Blockers: 0.019 Human Hepatotoxicity (H-HT): 0.184
Drug-inuced Liver Injury (DILI): 0.063 AMES Toxicity: 0.022
Rat Oral Acute Toxicity: 0.017 Maximum Recommended Daily Dose: 0.037
Skin Sensitization: 0.525 Carcinogencity: 0.179
Eye Corrosion: 0.011 Eye Irritation: 0.437
Respiratory Toxicity: 0.042
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005480 0.288 D0YH0N 0.254
ENC000525 0.283 D0EP8X 0.243
ENC003364 0.268 D0P4MT 0.221
ENC000899 0.255 D03CHT 0.188
ENC005481 0.255 D0Z8AA 0.176
ENC005815 0.254 D0CT4D 0.172
ENC000017 0.242 D0Z8SF 0.170
ENC004979 0.238 D0Z9QR 0.167
ENC003976 0.225 D06FDR 0.167
ENC004536 0.224 D0Z4BV 0.163
*Note: the compound similarity was calculated by RDKIT.