NPs Basic Information

Name
cyclo-(Pro-Ser)
Molecular Formula C9H14N2O3
IUPAC Name*
3-(2-hydroxyethyl)-2,3,6,7,8,8a-hexahydropyrrolo[1,2-a]pyrazine-1,4-dione
SMILES
O=C1NC(CCO)C(=O)N2CCCC12
InChI
InChI=1S/C9H14N2O3/c12-5-3-6-9(14)11-4-1-2-7(11)8(13)10-6/h6-7,12H,1-5H2,(H,10,13)/t6-,7-/m0/s1
InChIKey
QNCNZIRTMBVWKD-BQBZGAKWSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Carboxylic acids and deri
        • Subclass: Amino acids, peptides, an
          • Direct Parent: Alpha amino acids and der

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 198.22 ALogp: -1.1
HBD: 2 HBA: 3
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 69.6 Aromatic Rings: 2
Heavy Atoms: 14 QED Weighted: 0.62

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.342 MDCK Permeability: 0.00027689
Pgp-inhibitor: 0.002 Pgp-substrate: 0.008
Human Intestinal Absorption (HIA): 0.816 20% Bioavailability (F20%): 0.589
30% Bioavailability (F30%): 0.403

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.418 Plasma Protein Binding (PPB): 7.52%
Volume Distribution (VD): 0.571 Fu: 87.06%

ADMET: Metabolism

CYP1A2-inhibitor: 0.007 CYP1A2-substrate: 0.103
CYP2C19-inhibitor: 0.025 CYP2C19-substrate: 0.109
CYP2C9-inhibitor: 0.01 CYP2C9-substrate: 0.599
CYP2D6-inhibitor: 0.003 CYP2D6-substrate: 0.162
CYP3A4-inhibitor: 0.006 CYP3A4-substrate: 0.072

ADMET: Excretion

Clearance (CL): 3.504 Half-life (T1/2): 0.776

ADMET: Toxicity

hERG Blockers: 0.007 Human Hepatotoxicity (H-HT): 0.626
Drug-inuced Liver Injury (DILI): 0.155 AMES Toxicity: 0.01
Rat Oral Acute Toxicity: 0.071 Maximum Recommended Daily Dose: 0.131
Skin Sensitization: 0.198 Carcinogencity: 0.028
Eye Corrosion: 0.004 Eye Irritation: 0.032
Respiratory Toxicity: 0.046
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005974 0.633 D0Q5NX 0.227
ENC000834 0.633 D09ZIO 0.207
ENC005848 0.633 D0I0EG 0.206
ENC005708 0.633 D0Q4YK 0.200
ENC001907 0.633 D02IIW 0.197
ENC004743 0.600 D0CL9S 0.197
ENC002258 0.600 D0TS1Z 0.197
ENC005481 0.600 D09PZO 0.197
ENC001820 0.600 D05QIM 0.194
ENC005973 0.540 D08BTB 0.191
*Note: the compound similarity was calculated by RDKIT.