NPs Basic Information

Name
3-Methyl-5-propylnonane
Molecular Formula C13H28
IUPAC Name*
3-methyl-5-propylnonane
SMILES
CCCCC(CCC)CC(C)CC
InChI
InChI=1S/C13H28/c1-5-8-10-13(9-6-2)11-12(4)7-3/h12-13H,5-11H2,1-4H3
InChIKey
XHJWMVOQYQFTBM-UHFFFAOYSA-N
Synonyms
3-Methyl-5-propylnonane; Nonane, 3-methyl-5-propyl-; 31081-18-2; 3-Methyl-5-propylnonane #; DTXSID30338025
CAS 31081-18-2
PubChem CID 545955
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Saturated hydrocarbons
        • Subclass: Alkanes
          • Direct Parent: Branched alkanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 184.36 ALogp: 6.7
HBD: 0 HBA: 0
Rotatable Bonds: 8 Lipinski's rule of five: Rejected
Polar Surface Area: 0.0 Aromatic Rings: 0
Heavy Atoms: 13 QED Weighted: 0.476

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.361 MDCK Permeability: 0.00001160
Pgp-inhibitor: 0.031 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.002 20% Bioavailability (F20%): 0.491
30% Bioavailability (F30%): 0.929

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.527 Plasma Protein Binding (PPB): 97.65%
Volume Distribution (VD): 2.826 Fu: 1.93%

ADMET: Metabolism

CYP1A2-inhibitor: 0.886 CYP1A2-substrate: 0.542
CYP2C19-inhibitor: 0.554 CYP2C19-substrate: 0.811
CYP2C9-inhibitor: 0.498 CYP2C9-substrate: 0.789
CYP2D6-inhibitor: 0.275 CYP2D6-substrate: 0.096
CYP3A4-inhibitor: 0.353 CYP3A4-substrate: 0.136

ADMET: Excretion

Clearance (CL): 8.024 Half-life (T1/2): 0.152

ADMET: Toxicity

hERG Blockers: 0.058 Human Hepatotoxicity (H-HT): 0.016
Drug-inuced Liver Injury (DILI): 0.036 AMES Toxicity: 0.003
Rat Oral Acute Toxicity: 0.021 Maximum Recommended Daily Dose: 0.048
Skin Sensitization: 0.832 Carcinogencity: 0.038
Eye Corrosion: 0.993 Eye Irritation: 0.976
Respiratory Toxicity: 0.168
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001174 0.595 D03LGY 0.313
ENC001126 0.581 D0X4FM 0.310
ENC001129 0.558 D0Y3KG 0.298
ENC000628 0.556 D0ZI4H 0.226
ENC001128 0.556 D0N3NO 0.225
ENC001131 0.556 D08QME 0.217
ENC001132 0.556 D07CNL 0.213
ENC000506 0.553 D00MYT 0.203
ENC000582 0.523 D0F0YZ 0.203
ENC000769 0.522 D0H2SY 0.200
*Note: the compound similarity was calculated by RDKIT.