NPs Basic Information

Name
5-(1-Methylpropyl)nonane
Molecular Formula C13H28
IUPAC Name*
5-butan-2-ylnonane
SMILES
CCCCC(CCCC)C(C)CC
InChI
InChI=1S/C13H28/c1-5-8-10-13(11-9-6-2)12(4)7-3/h12-13H,5-11H2,1-4H3
InChIKey
MYBISLOUUPIYHV-UHFFFAOYSA-N
Synonyms
5-(1-METHYLPROPYL)NONANE; 62185-54-0; Nonane, 5-(1-methylpropyl)-; 5-Sec-butylnonane #; 5-(butan-2-yl)nonane; DTXSID80977766; LMFA11000698
CAS 62185-54-0
PubChem CID 43943
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Saturated hydrocarbons
        • Subclass: Alkanes
          • Direct Parent: Branched alkanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 184.36 ALogp: 6.7
HBD: 0 HBA: 0
Rotatable Bonds: 8 Lipinski's rule of five: Rejected
Polar Surface Area: 0.0 Aromatic Rings: 0
Heavy Atoms: 13 QED Weighted: 0.476

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.358 MDCK Permeability: 0.00001090
Pgp-inhibitor: 0.036 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.003 20% Bioavailability (F20%): 0.707
30% Bioavailability (F30%): 0.966

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.299 Plasma Protein Binding (PPB): 97.81%
Volume Distribution (VD): 3.19 Fu: 1.82%

ADMET: Metabolism

CYP1A2-inhibitor: 0.549 CYP1A2-substrate: 0.832
CYP2C19-inhibitor: 0.459 CYP2C19-substrate: 0.866
CYP2C9-inhibitor: 0.392 CYP2C9-substrate: 0.676
CYP2D6-inhibitor: 0.282 CYP2D6-substrate: 0.072
CYP3A4-inhibitor: 0.493 CYP3A4-substrate: 0.233

ADMET: Excretion

Clearance (CL): 7.495 Half-life (T1/2): 0.11

ADMET: Toxicity

hERG Blockers: 0.083 Human Hepatotoxicity (H-HT): 0.02
Drug-inuced Liver Injury (DILI): 0.311 AMES Toxicity: 0.004
Rat Oral Acute Toxicity: 0.065 Maximum Recommended Daily Dose: 0.012
Skin Sensitization: 0.331 Carcinogencity: 0.035
Eye Corrosion: 0.992 Eye Irritation: 0.986
Respiratory Toxicity: 0.081
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001132 0.591 D0X4FM 0.325
ENC001248 0.556 D03LGY 0.294
ENC000903 0.525 D0Y3KG 0.271
ENC001041 0.511 D08QME 0.217
ENC000769 0.489 D01QLH 0.213
ENC001128 0.489 D0ZI4H 0.213
ENC001129 0.489 D06ORU 0.213
ENC001174 0.489 D0N3NO 0.211
ENC001126 0.478 D0T9TJ 0.209
ENC000519 0.477 D0AY9Q 0.203
*Note: the compound similarity was calculated by RDKIT.