NPs Basic Information

Name
Bicyclo[5.2.0] nonan
Molecular Formula C9H16
IUPAC Name*
bicyclo[5.2.0]nonane
SMILES
C1CCC2CCC2CC1
InChI
InChI=1S/C9H16/c1-2-4-8-6-7-9(8)5-3-1/h8-9H,1-7H2
InChIKey
TWONWILUDBHKQU-UHFFFAOYSA-N
Synonyms
bicyclo[5.2.0] nonan
CAS NA
PubChem CID 524792
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Polycyclic hydrocarbons
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Polycyclic hydrocarbons

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 124.22 ALogp: 4.1
HBD: 0 HBA: 0
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 0.0 Aromatic Rings: 2
Heavy Atoms: 9 QED Weighted: 0.461

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.543 MDCK Permeability: 0.00002080
Pgp-inhibitor: 0.002 Pgp-substrate: 0
Human Intestinal Absorption (HIA): 0.003 20% Bioavailability (F20%): 0.117
30% Bioavailability (F30%): 0.76

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.843 Plasma Protein Binding (PPB): 94.05%
Volume Distribution (VD): 2.353 Fu: 4.95%

ADMET: Metabolism

CYP1A2-inhibitor: 0.894 CYP1A2-substrate: 0.757
CYP2C19-inhibitor: 0.387 CYP2C19-substrate: 0.6
CYP2C9-inhibitor: 0.326 CYP2C9-substrate: 0.784
CYP2D6-inhibitor: 0.075 CYP2D6-substrate: 0.846
CYP3A4-inhibitor: 0.147 CYP3A4-substrate: 0.216

ADMET: Excretion

Clearance (CL): 8.208 Half-life (T1/2): 0.199

ADMET: Toxicity

hERG Blockers: 0.058 Human Hepatotoxicity (H-HT): 0.129
Drug-inuced Liver Injury (DILI): 0.754 AMES Toxicity: 0.128
Rat Oral Acute Toxicity: 0.036 Maximum Recommended Daily Dose: 0.119
Skin Sensitization: 0.945 Carcinogencity: 0.228
Eye Corrosion: 0.989 Eye Irritation: 0.984
Respiratory Toxicity: 0.854
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000170 0.658 D04URO 0.489
ENC000492 0.341 D03DVJ 0.318
ENC004910 0.333 D0L0MK 0.300
ENC000183 0.333 D00SBN 0.279
ENC003404 0.328 D0P6VV 0.258
ENC004377 0.328 D04JPJ 0.255
ENC000644 0.318 D07GRH 0.255
ENC001306 0.304 D0N4PZ 0.254
ENC001283 0.304 D08VSI 0.250
ENC001222 0.298 D0P2YU 0.240
*Note: the compound similarity was calculated by RDKIT.