NPs Basic Information

Name
2,5-Dimethylnonane
Molecular Formula C11H24
IUPAC Name*
2,5-dimethylnonane
SMILES
CCCCC(C)CCC(C)C
InChI
InChI=1S/C11H24/c1-5-6-7-11(4)9-8-10(2)3/h10-11H,5-9H2,1-4H3
InChIKey
NQUMJENPNGXAIH-UHFFFAOYSA-N
Synonyms
2,5-DIMETHYLNONANE; Nonane, 2,5-dimethyl-; 17302-27-1; 2,5-Dimethylnonan; DTXSID20938275; LMFA11000613
CAS 17302-27-1
PubChem CID 28456
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Saturated hydrocarbons
        • Subclass: Alkanes
          • Direct Parent: Branched alkanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 156.31 ALogp: 5.6
HBD: 0 HBA: 0
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 0.0 Aromatic Rings: 0
Heavy Atoms: 11 QED Weighted: 0.517

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.276 MDCK Permeability: 0.00001560
Pgp-inhibitor: 0.002 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.003 20% Bioavailability (F20%): 0.547
30% Bioavailability (F30%): 0.908

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.59 Plasma Protein Binding (PPB): 97.29%
Volume Distribution (VD): 2.608 Fu: 2.61%

ADMET: Metabolism

CYP1A2-inhibitor: 0.823 CYP1A2-substrate: 0.463
CYP2C19-inhibitor: 0.5 CYP2C19-substrate: 0.881
CYP2C9-inhibitor: 0.604 CYP2C9-substrate: 0.939
CYP2D6-inhibitor: 0.023 CYP2D6-substrate: 0.071
CYP3A4-inhibitor: 0.065 CYP3A4-substrate: 0.153

ADMET: Excretion

Clearance (CL): 7.781 Half-life (T1/2): 0.172

ADMET: Toxicity

hERG Blockers: 0.029 Human Hepatotoxicity (H-HT): 0.022
Drug-inuced Liver Injury (DILI): 0.143 AMES Toxicity: 0.005
Rat Oral Acute Toxicity: 0.036 Maximum Recommended Daily Dose: 0.017
Skin Sensitization: 0.677 Carcinogencity: 0.06
Eye Corrosion: 0.991 Eye Irritation: 0.981
Respiratory Toxicity: 0.262
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001129 0.694 D0Y3KG 0.250
ENC001128 0.641 D03LGY 0.242
ENC000503 0.618 D00FSV 0.237
ENC000506 0.606 D0R6BR 0.224
ENC000769 0.600 D01QLH 0.214
ENC001207 0.575 D0ZI4H 0.213
ENC000806 0.568 D00WUF 0.213
ENC001208 0.568 D0N3NO 0.212
ENC000582 0.564 D0X4FM 0.209
ENC001144 0.564 D05PLH 0.206
*Note: the compound similarity was calculated by RDKIT.