NPs Basic Information

Name
Citronellal
Molecular Formula C10H18O
IUPAC Name*
3,7-dimethyloct-6-enal
SMILES
CC(CCC=C(C)C)CC=O
InChI
InChI=1S/C10H18O/c1-9(2)5-4-6-10(3)7-8-11/h5,8,10H,4,6-7H2,1-3H3
InChIKey
NEHNMFOYXAPHSD-UHFFFAOYSA-N
Synonyms
CITRONELLAL; 106-23-0; 3,7-Dimethyloct-6-enal; 3,7-Dimethyl-6-octenal; Rhodinal; 6-Octenal, 3,7-dimethyl-; 2,3-Dihydrocitral; (+/-)-Citronellal; Citronellel; beta-Citronellal; 3,7-Dimethyl-6-octen-1-al; 8000-29-1; CITRONELLOL,(D); .beta.-Citronellal; FEMA No. 2307; NSC 46106; CHEBI:47856; QB99VZZ7GZ; 3,7-dimethyl-oct-6-enal; 3,7-dimethyloct-6-en-1-al; NSC46106; NSC-46106; Citronella; D-Rhodinal; 6-Octenal, 3,7-dimethyl-, (R)-; Rhodinal (VAN); Citronella (natural); HSDB 594; EINECS 203-376-6; UNII-QB99VZZ7GZ; AI3-00203; CCRIS 8421; beta -Citronellal; racemic citronellal; (RS)-citronellal; (+/-)-3,7-Dimethyl-6-octenal; MFCD00038090; (+/-) citronellal; ( inverted exclamation markA)-Citronellal; 6-Octenal,7-dimethyl-; CITRONELLAL [MI]; CITRONELLAL [FCC]; CITRONELLAL [FHFI]; CITRONELLAL [HSDB]; CITRONELLAL [INCI]; Epitope ID:112868; EC 203-376-6; DSSTox_CID_21790; DSSTox_RID_79843; DSSTox_GSID_41790; SCHEMBL29275; CHEMBL447944; GTPL6300; DTXSID3041790; FEMA 2307; HY-N7126; Tox21_301195; c1026; s5585; AKOS000121405; (+/-)-Citronellal, >=85%, FG; CCG-266248; CS-W010931; (+/-)-Citronellal, analytical standard; NCGC00248328-01; NCGC00255093-01; AS-54400; CAS-106-23-0; (+/-)-Citronellal, >=95.0% (GC); DB-040680; DB-072650; C3648; FT-0604386; FT-0623961; FT-0623963; FT-0699573; EN300-21458; C17384; P50009; (+/-)-Citronellal, natural, >=85%, FCC, FG; A801397; J-502100; W-108770; Q61651085; Z104497952
CAS 106-23-0
PubChem CID 7794
ChEMBL ID CHEMBL447944
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Monoterpenoids
          • Direct Parent: Acyclic monoterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 154.25 ALogp: 3.0
HBD: 0 HBA: 1
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 17.1 Aromatic Rings: 0
Heavy Atoms: 11 QED Weighted: 0.435

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.407 MDCK Permeability: 0.00002340
Pgp-inhibitor: 0.023 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.006 20% Bioavailability (F20%): 0.815
30% Bioavailability (F30%): 0.108

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.99 Plasma Protein Binding (PPB): 68.87%
Volume Distribution (VD): 3.407 Fu: 18.17%

ADMET: Metabolism

CYP1A2-inhibitor: 0.578 CYP1A2-substrate: 0.406
CYP2C19-inhibitor: 0.116 CYP2C19-substrate: 0.669
CYP2C9-inhibitor: 0.037 CYP2C9-substrate: 0.728
CYP2D6-inhibitor: 0.049 CYP2D6-substrate: 0.269
CYP3A4-inhibitor: 0.033 CYP3A4-substrate: 0.188

ADMET: Excretion

Clearance (CL): 13.045 Half-life (T1/2): 0.418

ADMET: Toxicity

hERG Blockers: 0.012 Human Hepatotoxicity (H-HT): 0.508
Drug-inuced Liver Injury (DILI): 0.03 AMES Toxicity: 0.024
Rat Oral Acute Toxicity: 0.011 Maximum Recommended Daily Dose: 0.021
Skin Sensitization: 0.961 Carcinogencity: 0.491
Eye Corrosion: 0.976 Eye Irritation: 0.987
Respiratory Toxicity: 0.859
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000229 0.600 D0M1PQ 0.486
ENC000311 0.568 D0ZK8H 0.225
ENC000319 0.500 D09XWD 0.221
ENC003366 0.478 D05XQE 0.219
ENC001150 0.422 D0Y3KG 0.196
ENC001434 0.415 D04MWJ 0.191
ENC001424 0.415 D00WUF 0.188
ENC001649 0.391 D03VFL 0.176
ENC001718 0.375 D0Q9HF 0.174
ENC000846 0.355 D0Q6DX 0.172
*Note: the compound similarity was calculated by RDKIT.