NPs Basic Information

Name
(3R,4R,5S,6R,10R)-penicillospirone
Molecular Formula C13H16O5
IUPAC Name*
4,6-dihydroxy-3-methyl-10-prop-1-enyl-2-oxaspiro[4.5]dec-8-ene-1,7-dione
SMILES
CC=CC1C=CC(=O)C(O)C12C(=O)OC(C)C2O
InChI
InChI=1S/C13H16O5/c1-3-4-8-5-6-9(14)11(16)13(8)10(15)7(2)18-12(13)17/h3-8,10-11,15-16H,1-2H3/b4-3+/t7-,8-,10+,11+,13+/m1/s1
InChIKey
KRDUCTYOAPQUHL-MDJBZBTRSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbonyl compounds
          • Direct Parent: Cyclohexenones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 252.27 ALogp: 0.0
HBD: 2 HBA: 5
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 83.8 Aromatic Rings: 2
Heavy Atoms: 18 QED Weighted: 0.52

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.816 MDCK Permeability: 0.00009360
Pgp-inhibitor: 0.028 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.142 20% Bioavailability (F20%): 0.015
30% Bioavailability (F30%): 0.192

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.996 Plasma Protein Binding (PPB): 29.32%
Volume Distribution (VD): 0.48 Fu: 62.40%

ADMET: Metabolism

CYP1A2-inhibitor: 0.019 CYP1A2-substrate: 0.495
CYP2C19-inhibitor: 0.029 CYP2C19-substrate: 0.797
CYP2C9-inhibitor: 0.005 CYP2C9-substrate: 0.292
CYP2D6-inhibitor: 0.007 CYP2D6-substrate: 0.24
CYP3A4-inhibitor: 0.064 CYP3A4-substrate: 0.292

ADMET: Excretion

Clearance (CL): 8.515 Half-life (T1/2): 0.369

ADMET: Toxicity

hERG Blockers: 0.006 Human Hepatotoxicity (H-HT): 0.121
Drug-inuced Liver Injury (DILI): 0.081 AMES Toxicity: 0.052
Rat Oral Acute Toxicity: 0.237 Maximum Recommended Daily Dose: 0.041
Skin Sensitization: 0.185 Carcinogencity: 0.791
Eye Corrosion: 0.003 Eye Irritation: 0.021
Respiratory Toxicity: 0.072
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001761 0.627 D03KXY 0.257
ENC005952 0.627 D0K7LU 0.228
ENC001883 0.345 D0Y7DP 0.221
ENC005124 0.345 D03TGJ 0.214
ENC005640 0.292 D0G6AB 0.209
ENC003396 0.292 D00HCQ 0.196
ENC001414 0.289 D0R2KF 0.193
ENC001753 0.288 D0E9KA 0.193
ENC004776 0.288 D07XSN 0.190
ENC004028 0.287 D0CL9S 0.190
*Note: the compound similarity was calculated by RDKIT.