NPs Basic Information

Name
Cytospone E
Molecular Formula C12H18O5
IUPAC Name*
6-(1,2-dihydroxypentyl)-4-methoxy-5-methylpyran-2-one
SMILES
CCCC(O)C(O)c1oc(=O)cc(OC)c1C
InChI
InChI=1S/C12H18O5/c1-4-5-8(13)11(15)12-7(2)9(16-3)6-10(14)17-12/h6,8,11,13,15H,4-5H2,1-3H3/t8-,11+/m1/s1
InChIKey
LYHDGMCYBJZQGO-KCJUWKMLSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 242.27 ALogp: 1.2
HBD: 2 HBA: 5
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 79.9 Aromatic Rings: 1
Heavy Atoms: 17 QED Weighted: 0.82

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.823 MDCK Permeability: 0.00010316
Pgp-inhibitor: 0 Pgp-substrate: 0.535
Human Intestinal Absorption (HIA): 0.055 20% Bioavailability (F20%): 0.011
30% Bioavailability (F30%): 0.268

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.706 Plasma Protein Binding (PPB): 77.72%
Volume Distribution (VD): 0.912 Fu: 26.00%

ADMET: Metabolism

CYP1A2-inhibitor: 0.081 CYP1A2-substrate: 0.913
CYP2C19-inhibitor: 0.03 CYP2C19-substrate: 0.862
CYP2C9-inhibitor: 0.013 CYP2C9-substrate: 0.698
CYP2D6-inhibitor: 0.009 CYP2D6-substrate: 0.473
CYP3A4-inhibitor: 0.007 CYP3A4-substrate: 0.211

ADMET: Excretion

Clearance (CL): 9.29 Half-life (T1/2): 0.775

ADMET: Toxicity

hERG Blockers: 0.012 Human Hepatotoxicity (H-HT): 0.563
Drug-inuced Liver Injury (DILI): 0.512 AMES Toxicity: 0.022
Rat Oral Acute Toxicity: 0.066 Maximum Recommended Daily Dose: 0.021
Skin Sensitization: 0.077 Carcinogencity: 0.043
Eye Corrosion: 0.004 Eye Irritation: 0.056
Respiratory Toxicity: 0.026
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001413 0.640 D09GYT 0.269
ENC003474 0.600 D0L5FY 0.241
ENC005859 0.571 D06REO 0.238
ENC005633 0.524 D02XJY 0.237
ENC001982 0.518 D0FA2O 0.227
ENC003466 0.492 D08VYV 0.222
ENC003311 0.470 D08HUC 0.216
ENC005634 0.467 D0Z1WA 0.214
ENC003262 0.456 D06GCK 0.213
ENC004940 0.441 D05QDC 0.211
*Note: the compound similarity was calculated by RDKIT.