NPs Basic Information

Name
5-Deoxy-7-hyrdoxypyrenocine M
Molecular Formula C12H18O4
IUPAC Name*
6-[(2R)-2-hydroxypentyl]-4-methoxy-5-methylpyran-2-one
SMILES
CCC[C@H](CC1=C(C(=CC(=O)O1)OC)C)O
InChI
InChI=1S/C12H18O4/c1-4-5-9(13)6-11-8(2)10(15-3)7-12(14)16-11/h7,9,13H,4-6H2,1-3H3/t9-/m1/s1
InChIKey
OKNIHUHBCHHCOI-SECBINFHSA-N
Synonyms
5-Deoxy-7-hyrdoxypyrenocine M; CHEMBL3965967
CAS NA
PubChem CID 134150679
ChEMBL ID CHEMBL3965967
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 226.27 ALogp: 1.3
HBD: 1 HBA: 4
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 55.8 Aromatic Rings: 1
Heavy Atoms: 16 QED Weighted: 0.836

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.714 MDCK Permeability: 0.00008470
Pgp-inhibitor: 0.002 Pgp-substrate: 0.993
Human Intestinal Absorption (HIA): 0.007 20% Bioavailability (F20%): 0.005
30% Bioavailability (F30%): 0.027

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.443 Plasma Protein Binding (PPB): 81.66%
Volume Distribution (VD): 0.766 Fu: 26.12%

ADMET: Metabolism

CYP1A2-inhibitor: 0.784 CYP1A2-substrate: 0.942
CYP2C19-inhibitor: 0.27 CYP2C19-substrate: 0.813
CYP2C9-inhibitor: 0.074 CYP2C9-substrate: 0.665
CYP2D6-inhibitor: 0.012 CYP2D6-substrate: 0.676
CYP3A4-inhibitor: 0.027 CYP3A4-substrate: 0.21

ADMET: Excretion

Clearance (CL): 11.487 Half-life (T1/2): 0.708

ADMET: Toxicity

hERG Blockers: 0.012 Human Hepatotoxicity (H-HT): 0.787
Drug-inuced Liver Injury (DILI): 0.656 AMES Toxicity: 0.078
Rat Oral Acute Toxicity: 0.102 Maximum Recommended Daily Dose: 0.777
Skin Sensitization: 0.212 Carcinogencity: 0.696
Eye Corrosion: 0.083 Eye Irritation: 0.443
Respiratory Toxicity: 0.075
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003466 0.712 D0L5FY 0.247
ENC005632 0.600 D06REO 0.244
ENC001413 0.569 D08VYV 0.244
ENC005634 0.509 D02XJY 0.243
ENC003262 0.500 D01SAT 0.239
ENC005633 0.492 D09GYT 0.239
ENC005637 0.483 D0FA2O 0.233
ENC004940 0.456 D00MYT 0.232
ENC004939 0.456 D0F0YZ 0.232
ENC001982 0.456 D0HD9K 0.227
*Note: the compound similarity was calculated by RDKIT.