NPs Basic Information

Name
E-Δ2-anhydromevalonic acid
Molecular Formula C6H10O3
IUPAC Name*
5-hydroxy-3-methylpent-2-enoicacid
SMILES
CC(=CC(=O)O)CCO
InChI
InChI=1S/C6H10O3/c1-5(2-3-7)4-6(8)9/h4,7H,2-3H2,1H3,(H,8,9)/b5-4+
InChIKey
RDOTWGWEIPDTSY-SNAWJCMRSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty acids and conjugate
          • Direct Parent: Hydroxy fatty acids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 130.14 ALogp: 0.4
HBD: 2 HBA: 2
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 57.5 Aromatic Rings: 0
Heavy Atoms: 9 QED Weighted: 0.555

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.975 MDCK Permeability: 0.00003140
Pgp-inhibitor: 0.001 Pgp-substrate: 0.082
Human Intestinal Absorption (HIA): 0.206 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.776

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.834 Plasma Protein Binding (PPB): 18.09%
Volume Distribution (VD): 0.393 Fu: 75.02%

ADMET: Metabolism

CYP1A2-inhibitor: 0.023 CYP1A2-substrate: 0.089
CYP2C19-inhibitor: 0.032 CYP2C19-substrate: 0.057
CYP2C9-inhibitor: 0.074 CYP2C9-substrate: 0.423
CYP2D6-inhibitor: 0.03 CYP2D6-substrate: 0.165
CYP3A4-inhibitor: 0.012 CYP3A4-substrate: 0.059

ADMET: Excretion

Clearance (CL): 2.86 Half-life (T1/2): 0.916

ADMET: Toxicity

hERG Blockers: 0.006 Human Hepatotoxicity (H-HT): 0.715
Drug-inuced Liver Injury (DILI): 0.058 AMES Toxicity: 0.011
Rat Oral Acute Toxicity: 0.018 Maximum Recommended Daily Dose: 0.021
Skin Sensitization: 0.914 Carcinogencity: 0.043
Eye Corrosion: 0.962 Eye Irritation: 0.993
Respiratory Toxicity: 0.038
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005356 0.500 D0EP8X 0.367
ENC000677 0.462 D06VNK 0.303
ENC006075 0.375 D04CRL 0.292
ENC000453 0.357 D0G4JI 0.286
ENC000377 0.323 D09KDV 0.267
ENC004359 0.316 D00ENY 0.263
ENC001585 0.314 D02UDJ 0.250
ENC001701 0.314 D07SJT 0.245
ENC000018 0.310 D0Y7ZD 0.243
ENC000288 0.308 D0R3QY 0.243
*Note: the compound similarity was calculated by RDKIT.