NPs Basic Information

Name
dioxopiperazine
Molecular Formula C16H19N3O2S2
IUPAC Name*
3-(1H-indol-3-ylmethyl)-6-methyl-3,6-bis(methylsulfanyl)piperazine-2,5-dione
SMILES
CSC1(C)NC(=O)C(Cc2c[nH]c3ccccc23)(SC)NC1=O
InChI
InChI=1S/C16H19N3O2S2/c1-15(22-2)13(20)19-16(23-3,14(21)18-15)8-10-9-17-12-7-5-4-6-11(10)12/h4-7,9,17H,8H2,1-3H3,(H,18,21)(H,19,20)/t15-,16-/m0/s1
InChIKey
WZCXTZDWTILORX-HOTGVXAUSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Carboxylic acids and deri
        • Subclass: Amino acids, peptides, an
          • Direct Parent: Alpha amino acids and der

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 349.48 ALogp: 2.1
HBD: 3 HBA: 4
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 74.0 Aromatic Rings: 3
Heavy Atoms: 23 QED Weighted: 0.793

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.623 MDCK Permeability: 0.00001520
Pgp-inhibitor: 0.001 Pgp-substrate: 0.122
Human Intestinal Absorption (HIA): 0.014 20% Bioavailability (F20%): 0.001
30% Bioavailability (F30%): 0.001

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.659 Plasma Protein Binding (PPB): 93.42%
Volume Distribution (VD): 0.843 Fu: 10.99%

ADMET: Metabolism

CYP1A2-inhibitor: 0.359 CYP1A2-substrate: 0.942
CYP2C19-inhibitor: 0.939 CYP2C19-substrate: 0.847
CYP2C9-inhibitor: 0.883 CYP2C9-substrate: 0.847
CYP2D6-inhibitor: 0.561 CYP2D6-substrate: 0.112
CYP3A4-inhibitor: 0.739 CYP3A4-substrate: 0.939

ADMET: Excretion

Clearance (CL): 9.299 Half-life (T1/2): 0.681

ADMET: Toxicity

hERG Blockers: 0.004 Human Hepatotoxicity (H-HT): 0.21
Drug-inuced Liver Injury (DILI): 0.89 AMES Toxicity: 0.015
Rat Oral Acute Toxicity: 0.215 Maximum Recommended Daily Dose: 0.106
Skin Sensitization: 0.107 Carcinogencity: 0.062
Eye Corrosion: 0.003 Eye Irritation: 0.012
Respiratory Toxicity: 0.009
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004870 0.770 D05EJG 0.359
ENC003991 0.620 D0Y7RW 0.306
ENC004343 0.541 D0U5RT 0.298
ENC004345 0.541 D07RGW 0.286
ENC004344 0.541 D08UMH 0.284
ENC004342 0.541 D0W7WC 0.279
ENC005916 0.541 D0Z9NZ 0.267
ENC005917 0.541 D0Z6UC 0.266
ENC004869 0.529 D03GET 0.266
ENC005918 0.471 D0NG7O 0.265
*Note: the compound similarity was calculated by RDKIT.