NPs Basic Information

Name
Solitumidine D
Molecular Formula C20H27N3O5
IUPAC Name*
(2S)-2-amino-5-[[3-[2-(2,2-dimethylbut-3-enoylamino)phenyl]-3-oxopropyl]amino]-5-oxopentanoic acid
SMILES
CC(C)(C=C)C(=O)NC1=CC=CC=C1C(=O)CCNC(=O)CC[C@@H](C(=O)O)N
InChI
InChI=1S/C20H27N3O5/c1-4-20(2,3)19(28)23-15-8-6-5-7-13(15)16(24)11-12-22-17(25)10-9-14(21)18(26)27/h4-8,14H,1,9-12,21H2,2-3H3,(H,22,25)(H,23,28)(H,26,27)/t14-/m0/s1
InChIKey
DWHMGFROGDTAJR-AWEZNQCLSA-N
Synonyms
Solitumidine D; CHEMBL4545261
CAS NA
PubChem CID 155552764
ChEMBL ID CHEMBL4545261
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Carboxylic acids and deri
        • Subclass: Amino acids, peptides, an
          • Direct Parent: Glutamine and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 389.4 ALogp: -1.0
HBD: 4 HBA: 6
Rotatable Bonds: 11 Lipinski's rule of five: Accepted
Polar Surface Area: 139.0 Aromatic Rings: 1
Heavy Atoms: 28 QED Weighted: 0.338

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.648 MDCK Permeability: 0.00004590
Pgp-inhibitor: 0.003 Pgp-substrate: 0.025
Human Intestinal Absorption (HIA): 0.032 20% Bioavailability (F20%): 0.002
30% Bioavailability (F30%): 0.001

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.529 Plasma Protein Binding (PPB): 32.27%
Volume Distribution (VD): 0.305 Fu: 67.66%

ADMET: Metabolism

CYP1A2-inhibitor: 0.019 CYP1A2-substrate: 0.052
CYP2C19-inhibitor: 0.059 CYP2C19-substrate: 0.055
CYP2C9-inhibitor: 0.15 CYP2C9-substrate: 0.425
CYP2D6-inhibitor: 0.028 CYP2D6-substrate: 0.158
CYP3A4-inhibitor: 0.061 CYP3A4-substrate: 0.099

ADMET: Excretion

Clearance (CL): 2.67 Half-life (T1/2): 0.708

ADMET: Toxicity

hERG Blockers: 0.019 Human Hepatotoxicity (H-HT): 0.049
Drug-inuced Liver Injury (DILI): 0.038 AMES Toxicity: 0.025
Rat Oral Acute Toxicity: 0.151 Maximum Recommended Daily Dose: 0.017
Skin Sensitization: 0.095 Carcinogencity: 0.014
Eye Corrosion: 0.003 Eye Irritation: 0.01
Respiratory Toxicity: 0.083
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003916 0.538 D02HFD 0.351
ENC004235 0.526 D0J7TM 0.304
ENC004232 0.521 D07JVS 0.286
ENC004237 0.480 D06LYG 0.280
ENC004236 0.480 D05QHL 0.278
ENC004234 0.431 D0E7PQ 0.277
ENC003483 0.358 D0R1CR 0.271
ENC005326 0.313 D0E6OC 0.268
ENC000544 0.300 D0X5SJ 0.267
ENC000684 0.299 D0GY5Z 0.264
*Note: the compound similarity was calculated by RDKIT.