NPs Basic Information

Name
Nigirpexin C
Molecular Formula C15H20O4
IUPAC Name*
(3S,6S,7R)-6,7-dihydroxy-7-methyl-3-[(1E,3E)-penta-1,3-dienyl]-3,4,5,6-tetrahydro-1H-isochromen-8-one
SMILES
C/C=C/C=C/[C@@H]1CC2=C(CO1)C(=O)[C@]([C@H](C2)O)(C)O
InChI
InChI=1S/C15H20O4/c1-3-4-5-6-11-7-10-8-13(16)15(2,18)14(17)12(10)9-19-11/h3-6,11,13,16,18H,7-9H2,1-2H3/b4-3+,6-5+/t11-,13+,15-/m1/s1
InChIKey
YULGBWALIANZCW-WDBKTXKOSA-N
Synonyms
Nigirpexin C
CAS NA
PubChem CID 146684396
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Azaphilones
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Azaphilones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 264.32 ALogp: 0.4
HBD: 2 HBA: 4
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 66.8 Aromatic Rings: 2
Heavy Atoms: 19 QED Weighted: 0.746

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.374 MDCK Permeability: 0.00001950
Pgp-inhibitor: 0.001 Pgp-substrate: 0.173
Human Intestinal Absorption (HIA): 0.079 20% Bioavailability (F20%): 0.944
30% Bioavailability (F30%): 0.807

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.966 Plasma Protein Binding (PPB): 47.58%
Volume Distribution (VD): 0.991 Fu: 49.77%

ADMET: Metabolism

CYP1A2-inhibitor: 0.093 CYP1A2-substrate: 0.506
CYP2C19-inhibitor: 0.04 CYP2C19-substrate: 0.704
CYP2C9-inhibitor: 0.016 CYP2C9-substrate: 0.816
CYP2D6-inhibitor: 0.012 CYP2D6-substrate: 0.452
CYP3A4-inhibitor: 0.057 CYP3A4-substrate: 0.195

ADMET: Excretion

Clearance (CL): 2.039 Half-life (T1/2): 0.499

ADMET: Toxicity

hERG Blockers: 0.009 Human Hepatotoxicity (H-HT): 0.653
Drug-inuced Liver Injury (DILI): 0.933 AMES Toxicity: 0.765
Rat Oral Acute Toxicity: 0.971 Maximum Recommended Daily Dose: 0.804
Skin Sensitization: 0.322 Carcinogencity: 0.542
Eye Corrosion: 0.027 Eye Irritation: 0.213
Respiratory Toxicity: 0.952
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005503 0.438 D0G6AB 0.200
ENC004211 0.408 D04VIS 0.200
ENC002495 0.408 D0W3OS 0.184
ENC004210 0.342 D0L2LS 0.182
ENC003691 0.337 D0Q6NZ 0.180
ENC004111 0.321 D0G5CF 0.175
ENC003396 0.313 D0N1TP 0.175
ENC003888 0.281 D02NSF 0.175
ENC005984 0.280 D01QUS 0.174
ENC004110 0.278 D0H1QY 0.174
*Note: the compound similarity was calculated by RDKIT.