NPs Basic Information

Name
Cytochalasin D
Molecular Formula C30H37NO6
IUPAC Name*
[(1R,5R)-16-benzyl-5,12-dihydroxy-5,7,14-trimethyl-13-methylidene-6,18-dioxo-17-azatricyclo[9.7.0.01,15]octadeca-3,9-dien-2-yl] acetate
SMILES
CC1CC=CC2C(C(=C)C(C3[C@@]2(C(C=C[C@@](C1=O)(C)O)OC(=O)C)C(=O)NC3CC4=CC=CC=C4)C)O
InChI
InChI=1S/C30H37NO6/c1-17-10-9-13-22-26(33)19(3)18(2)25-23(16-21-11-7-6-8-12-21)31-28(35)30(22,25)24(37-20(4)32)14-15-29(5,36)27(17)34/h6-9,11-15,17-18,22-26,33,36H,3,10,16H2,1-2,4-5H3,(H,31,35)/t17?,18?,22?,23?,24?,25?,26?,29-,30-/m1/s1
InChIKey
SDZRWUKZFQQKKV-BPYILLIUSA-N
Synonyms
cytochalasin D; Zygosporin A;NSC 209835; 22144-77-0
CAS 22144-77-0
PubChem CID 146158182
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Alkaloids and derivatives
      • Class: Cytochalasans
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Cytochalasans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 507.6 ALogp: 2.7
HBD: 3 HBA: 6
Rotatable Bonds: 4 Lipinski's rule of five: Rejected
Polar Surface Area: 113.0 Aromatic Rings: 4
Heavy Atoms: 37 QED Weighted: 0.425

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.942 MDCK Permeability: 0.00003880
Pgp-inhibitor: 0.035 Pgp-substrate: 0.031
Human Intestinal Absorption (HIA): 0.185 20% Bioavailability (F20%): 0.009
30% Bioavailability (F30%): 0.002

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.651 Plasma Protein Binding (PPB): 85.21%
Volume Distribution (VD): 1.683 Fu: 17.70%

ADMET: Metabolism

CYP1A2-inhibitor: 0.016 CYP1A2-substrate: 0.094
CYP2C19-inhibitor: 0.071 CYP2C19-substrate: 0.459
CYP2C9-inhibitor: 0.048 CYP2C9-substrate: 0.098
CYP2D6-inhibitor: 0.01 CYP2D6-substrate: 0.094
CYP3A4-inhibitor: 0.925 CYP3A4-substrate: 0.489

ADMET: Excretion

Clearance (CL): 2.984 Half-life (T1/2): 0.11

ADMET: Toxicity

hERG Blockers: 0.006 Human Hepatotoxicity (H-HT): 0.072
Drug-inuced Liver Injury (DILI): 0.874 AMES Toxicity: 0.012
Rat Oral Acute Toxicity: 0.731 Maximum Recommended Daily Dose: 0.409
Skin Sensitization: 0.016 Carcinogencity: 0.155
Eye Corrosion: 0.003 Eye Irritation: 0.009
Respiratory Toxicity: 0.524
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004468 0.818 D06CWH 0.274
ENC003300 0.802 D0V3ZA 0.273
ENC004463 0.772 D0SP3D 0.272
ENC004444 0.770 D01TSI 0.266
ENC005442 0.765 D09NNH 0.265
ENC002202 0.765 D0W7RJ 0.261
ENC004341 0.752 D0R1BD 0.252
ENC006059 0.752 D0A5LH 0.247
ENC005506 0.752 D0TB8C 0.245
ENC005175 0.752 D0D7KC 0.245
*Note: the compound similarity was calculated by RDKIT.