NPs Basic Information

Name
Trichocadinin D
Molecular Formula C15H22O2
IUPAC Name*
(4aR,8S,8aR)-5-methylidene-8-propan-2-yl-4,4a,6,7,8,8a-hexahydro-3H-naphthalene-2-carboxylic acid
SMILES
CC(C)[C@@H]1CCC(=C)[C@H]2[C@H]1C=C(CC2)C(=O)O
InChI
InChI=1S/C15H22O2/c1-9(2)12-6-4-10(3)13-7-5-11(15(16)17)8-14(12)13/h8-9,12-14H,3-7H2,1-2H3,(H,16,17)/t12-,13-,14-/m0/s1
InChIKey
DTPZSZZVUKXNSJ-IHRRRGAJSA-N
Synonyms
Trichocadinin D
CAS NA
PubChem CID 145721097
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 234.33 ALogp: 3.6
HBD: 1 HBA: 2
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 37.3 Aromatic Rings: 2
Heavy Atoms: 17 QED Weighted: 0.721

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.699 MDCK Permeability: 0.00001320
Pgp-inhibitor: 0 Pgp-substrate: 0.476
Human Intestinal Absorption (HIA): 0.007 20% Bioavailability (F20%): 0.687
30% Bioavailability (F30%): 0.025

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.75 Plasma Protein Binding (PPB): 61.25%
Volume Distribution (VD): 0.64 Fu: 9.85%

ADMET: Metabolism

CYP1A2-inhibitor: 0.056 CYP1A2-substrate: 0.182
CYP2C19-inhibitor: 0.021 CYP2C19-substrate: 0.297
CYP2C9-inhibitor: 0.037 CYP2C9-substrate: 0.845
CYP2D6-inhibitor: 0.015 CYP2D6-substrate: 0.249
CYP3A4-inhibitor: 0.02 CYP3A4-substrate: 0.189

ADMET: Excretion

Clearance (CL): 2.641 Half-life (T1/2): 0.272

ADMET: Toxicity

hERG Blockers: 0.011 Human Hepatotoxicity (H-HT): 0.119
Drug-inuced Liver Injury (DILI): 0.769 AMES Toxicity: 0.041
Rat Oral Acute Toxicity: 0.815 Maximum Recommended Daily Dose: 0.662
Skin Sensitization: 0.106 Carcinogencity: 0.818
Eye Corrosion: 0.01 Eye Irritation: 0.035
Respiratory Toxicity: 0.965
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002227 0.673 D04CSZ 0.293
ENC000800 0.673 D04ATM 0.250
ENC004007 0.621 D03KEK 0.246
ENC004004 0.469 D02KIU 0.242
ENC002223 0.381 D06PSS 0.236
ENC002224 0.381 D0S8LV 0.227
ENC000831 0.381 D00YWP 0.226
ENC004919 0.375 D04GJN 0.226
ENC002017 0.369 D02IIW 0.225
ENC003090 0.359 D0V2JK 0.224
*Note: the compound similarity was calculated by RDKIT.