NPs Basic Information

Name
Colletotricone B
Molecular Formula C14H20O4
IUPAC Name*
(4S,5R,6R)-6-hydroxy-5-(2-hydroxypropanoyl)-4-[(E)-pent-1-enyl]cyclohex-2-en-1-one
SMILES
CCC/C=C/[C@H]1C=CC(=O)[C@@H]([C@@H]1C(=O)C(C)O)O
InChI
InChI=1S/C14H20O4/c1-3-4-5-6-10-7-8-11(16)14(18)12(10)13(17)9(2)15/h5-10,12,14-15,18H,3-4H2,1-2H3/b6-5+/t9?,10-,12-,14-/m0/s1
InChIKey
IEIDOBRKKCUFLS-QYNOYBPCSA-N
Synonyms
Colletotricone B
CAS NA
PubChem CID 139591708
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbonyl compounds
          • Direct Parent: Cyclohexenones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 252.31 ALogp: 1.8
HBD: 2 HBA: 4
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 74.6 Aromatic Rings: 1
Heavy Atoms: 18 QED Weighted: 0.726

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.669 MDCK Permeability: 0.00002380
Pgp-inhibitor: 0.003 Pgp-substrate: 0.006
Human Intestinal Absorption (HIA): 0.012 20% Bioavailability (F20%): 0.9
30% Bioavailability (F30%): 0.84

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.415 Plasma Protein Binding (PPB): 96.83%
Volume Distribution (VD): 0.345 Fu: 2.69%

ADMET: Metabolism

CYP1A2-inhibitor: 0.875 CYP1A2-substrate: 0.735
CYP2C19-inhibitor: 0.237 CYP2C19-substrate: 0.166
CYP2C9-inhibitor: 0.468 CYP2C9-substrate: 0.732
CYP2D6-inhibitor: 0.741 CYP2D6-substrate: 0.417
CYP3A4-inhibitor: 0.276 CYP3A4-substrate: 0.209

ADMET: Excretion

Clearance (CL): 3.067 Half-life (T1/2): 0.811

ADMET: Toxicity

hERG Blockers: 0.019 Human Hepatotoxicity (H-HT): 0.034
Drug-inuced Liver Injury (DILI): 0.575 AMES Toxicity: 0.566
Rat Oral Acute Toxicity: 0.098 Maximum Recommended Daily Dose: 0.028
Skin Sensitization: 0.88 Carcinogencity: 0.074
Eye Corrosion: 0.004 Eye Irritation: 0.889
Respiratory Toxicity: 0.466
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003985 1.000 D0N3NO 0.271
ENC004814 0.627 D06FEA 0.258
ENC004813 0.627 D0ZI4H 0.233
ENC005640 0.400 D0I4DQ 0.232
ENC005862 0.316 D09ANG 0.220
ENC005292 0.282 D02RQU 0.217
ENC005953 0.280 D0V0IX 0.216
ENC001586 0.278 D0QQ6Q 0.215
ENC005531 0.275 D0X2UE 0.212
ENC005532 0.275 D05ZTH 0.212
*Note: the compound similarity was calculated by RDKIT.