NPs Basic Information

Name
(3R,4S)-3,6,8-trihydroxy-3-(hydroxymethyl)-4,5-dimethyl-4H-isochromen-1-one
Molecular Formula C12H14O6
IUPAC Name*
(3R,4S)-3,6,8-trihydroxy-3-(hydroxymethyl)-4,5-dimethyl-4H-isochromen-1-one
SMILES
C[C@H]1C2=C(C(=CC(=C2C(=O)O[C@]1(CO)O)O)O)C
InChI
InChI=1S/C12H14O6/c1-5-7(14)3-8(15)10-9(5)6(2)12(17,4-13)18-11(10)16/h3,6,13-15,17H,4H2,1-2H3/t6-,12-/m0/s1
InChIKey
AEEFUJJCLNUIMG-QTTZVWFDSA-N
Synonyms
CHEMBL4166106; Q57981745
CAS NA
PubChem CID 139033627
ChEMBL ID CHEMBL4166106
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Benzenoids
      • Class: Benzene and substituted d
        • Subclass: Benzoic acids and derivat
          • Direct Parent: Hydroxybenzoic acid deriv

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 254.24 ALogp: 1.0
HBD: 4 HBA: 6
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 107.0 Aromatic Rings: 2
Heavy Atoms: 18 QED Weighted: 0.551

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.243 MDCK Permeability: 0.00000439
Pgp-inhibitor: 0.001 Pgp-substrate: 0.552
Human Intestinal Absorption (HIA): 0.675 20% Bioavailability (F20%): 0.5
30% Bioavailability (F30%): 0.213

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.188 Plasma Protein Binding (PPB): 90.46%
Volume Distribution (VD): 0.879 Fu: 8.77%

ADMET: Metabolism

CYP1A2-inhibitor: 0.576 CYP1A2-substrate: 0.245
CYP2C19-inhibitor: 0.03 CYP2C19-substrate: 0.069
CYP2C9-inhibitor: 0.059 CYP2C9-substrate: 0.494
CYP2D6-inhibitor: 0.042 CYP2D6-substrate: 0.172
CYP3A4-inhibitor: 0.227 CYP3A4-substrate: 0.172

ADMET: Excretion

Clearance (CL): 11.627 Half-life (T1/2): 0.736

ADMET: Toxicity

hERG Blockers: 0.01 Human Hepatotoxicity (H-HT): 0.059
Drug-inuced Liver Injury (DILI): 0.824 AMES Toxicity: 0.464
Rat Oral Acute Toxicity: 0.016 Maximum Recommended Daily Dose: 0.023
Skin Sensitization: 0.241 Carcinogencity: 0.022
Eye Corrosion: 0.004 Eye Irritation: 0.764
Respiratory Toxicity: 0.154
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003584 0.459 D07AHW 0.258
ENC003148 0.453 D07MGA 0.256
ENC003694 0.438 D04AIT 0.221
ENC004991 0.413 D0U3YB 0.216
ENC005332 0.403 D0K8KX 0.216
ENC002496 0.391 D0S0LZ 0.213
ENC002497 0.391 D0R9WP 0.213
ENC005906 0.391 D0YH0N 0.212
ENC003279 0.381 D0BA6T 0.211
ENC002045 0.381 D0O1UZ 0.209
*Note: the compound similarity was calculated by RDKIT.