NPs Basic Information

Name
Rubralide C
Molecular Formula C10H10O5
IUPAC Name*
(3R)-4,6-dihydroxy-3-methoxy-5-methyl-3H-2-benzofuran-1-one
SMILES
CC1=C(C=C2C(=C1O)[C@@H](OC2=O)OC)O
InChI
InChI=1S/C10H10O5/c1-4-6(11)3-5-7(8(4)12)10(14-2)15-9(5)13/h3,10-12H,1-2H3/t10-/m1/s1
InChIKey
MEQAIIPMRAUIPD-SNVBAGLBSA-N
Synonyms
Rubralide C
CAS NA
PubChem CID 102516031
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzofurans
        • Subclass: Benzofuranones
          • Direct Parent: Benzofuranones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 210.18 ALogp: 1.0
HBD: 2 HBA: 5
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 76.0 Aromatic Rings: 2
Heavy Atoms: 15 QED Weighted: 0.69

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.988 MDCK Permeability: 0.00001180
Pgp-inhibitor: 0.001 Pgp-substrate: 0.005
Human Intestinal Absorption (HIA): 0.034 20% Bioavailability (F20%): 0.004
30% Bioavailability (F30%): 0.011

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.015 Plasma Protein Binding (PPB): 95.48%
Volume Distribution (VD): 0.638 Fu: 11.00%

ADMET: Metabolism

CYP1A2-inhibitor: 0.903 CYP1A2-substrate: 0.904
CYP2C19-inhibitor: 0.029 CYP2C19-substrate: 0.092
CYP2C9-inhibitor: 0.247 CYP2C9-substrate: 0.535
CYP2D6-inhibitor: 0.233 CYP2D6-substrate: 0.251
CYP3A4-inhibitor: 0.065 CYP3A4-substrate: 0.12

ADMET: Excretion

Clearance (CL): 13.947 Half-life (T1/2): 0.888

ADMET: Toxicity

hERG Blockers: 0.002 Human Hepatotoxicity (H-HT): 0.174
Drug-inuced Liver Injury (DILI): 0.958 AMES Toxicity: 0.355
Rat Oral Acute Toxicity: 0.623 Maximum Recommended Daily Dose: 0.33
Skin Sensitization: 0.698 Carcinogencity: 0.648
Eye Corrosion: 0.011 Eye Irritation: 0.865
Respiratory Toxicity: 0.381
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003702 0.547 D07MGA 0.263
ENC004367 0.518 D06GCK 0.239
ENC005912 0.518 D0J4IX 0.229
ENC005911 0.518 D07AHW 0.224
ENC004991 0.464 D0N0OU 0.222
ENC002496 0.464 D0Y7PG 0.221
ENC002497 0.464 D0S5CH 0.214
ENC005906 0.464 D0H6QU 0.213
ENC002799 0.407 D0U0OT 0.212
ENC005553 0.407 D0FA2O 0.208
*Note: the compound similarity was calculated by RDKIT.