NPs Basic Information

Name
(6S,7R,9R)-6,7-dihydroxy-9-propylnon-4-eno-9-lactone
Molecular Formula C12H20O4
IUPAC Name*
(2R,4R,5S,6Z)-4,5-dihydroxy-2-propyl-2,3,4,5,8,9-hexahydrooxecin-10-one
SMILES
CCC[C@@H]1C[C@H]([C@H](/C=C\CCC(=O)O1)O)O
InChI
InChI=1S/C12H20O4/c1-2-5-9-8-11(14)10(13)6-3-4-7-12(15)16-9/h3,6,9-11,13-14H,2,4-5,7-8H2,1H3/b6-3-/t9-,10+,11-/m1/s1
InChIKey
OGGQXAHFTKUSHF-MQZCMQEASA-N
Synonyms
(6S,7R,9R)-6,7-dihydroxy-9-propylnon-4-eno-9-lactone; (4Z,6S,7R,9R)-6,7,9-Trihydroxy-4-dodecenoic acid 1,9-lactone
CAS NA
PubChem CID 102231188
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Oxocins
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Oxocins

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 228.28 ALogp: 1.1
HBD: 2 HBA: 4
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 66.8 Aromatic Rings: 1
Heavy Atoms: 16 QED Weighted: 0.556

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.539 MDCK Permeability: 0.00035227
Pgp-inhibitor: 0.013 Pgp-substrate: 0.496
Human Intestinal Absorption (HIA): 0.016 20% Bioavailability (F20%): 0.967
30% Bioavailability (F30%): 0.999

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.721 Plasma Protein Binding (PPB): 45.26%
Volume Distribution (VD): 0.896 Fu: 55.60%

ADMET: Metabolism

CYP1A2-inhibitor: 0.031 CYP1A2-substrate: 0.097
CYP2C19-inhibitor: 0.022 CYP2C19-substrate: 0.369
CYP2C9-inhibitor: 0.011 CYP2C9-substrate: 0.953
CYP2D6-inhibitor: 0.006 CYP2D6-substrate: 0.36
CYP3A4-inhibitor: 0.035 CYP3A4-substrate: 0.161

ADMET: Excretion

Clearance (CL): 6.132 Half-life (T1/2): 0.921

ADMET: Toxicity

hERG Blockers: 0.031 Human Hepatotoxicity (H-HT): 0.45
Drug-inuced Liver Injury (DILI): 0.196 AMES Toxicity: 0.073
Rat Oral Acute Toxicity: 0.07 Maximum Recommended Daily Dose: 0.916
Skin Sensitization: 0.748 Carcinogencity: 0.68
Eye Corrosion: 0.066 Eye Irritation: 0.436
Respiratory Toxicity: 0.302
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005864 0.571 D06WTZ 0.265
ENC005863 0.422 D0H0ND 0.260
ENC005373 0.404 D04QNO 0.238
ENC005833 0.391 D0Y7IU 0.238
ENC003186 0.385 D0CL9S 0.216
ENC006036 0.385 D01WUA 0.206
ENC002454 0.367 D0X5XU 0.205
ENC000525 0.364 D0R2KF 0.203
ENC001935 0.350 D0HR8Z 0.200
ENC002508 0.349 D09PZO 0.200
*Note: the compound similarity was calculated by RDKIT.