NPs Basic Information

Name
D-Glycero-D-galactoheptose
Molecular Formula C7H14O7
IUPAC Name*
(2R,3S,4S,5R,6S)-2,3,4,5,6,7-hexahydroxyheptanal
SMILES
C([C@@H]([C@H]([C@@H]([C@@H]([C@H](C=O)O)O)O)O)O)O
InChI
InChI=1S/C7H14O7/c8-1-3(10)5(12)7(14)6(13)4(11)2-9/h1,3-7,9-14H,2H2/t3-,4-,5+,6+,7+/m0/s1
InChIKey
YPZMPEPLWKRVLD-PAMBMQIZSA-N
Synonyms
D-Mannoheptose; (2R,3S,4S,5R,6S)-2,3,4,5,6,7-Hexahydroxyheptanal; 5328-64-3; d-Glycero-d-galacto-heptose; 7634-39-1; D-Manno-heptose,(2x)-; D-Glycero-D-galactoheptose; SCHEMBL297397
CAS NA
PubChem CID 87088840
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Heptoses

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 210.18 ALogp: -3.6
HBD: 6 HBA: 7
Rotatable Bonds: 6 Lipinski's rule of five: Rejected
Polar Surface Area: 138.0 Aromatic Rings: 0
Heavy Atoms: 14 QED Weighted: 0.241

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.369 MDCK Permeability: 0.00266213
Pgp-inhibitor: 0.007 Pgp-substrate: 0.851
Human Intestinal Absorption (HIA): 0.217 20% Bioavailability (F20%): 0.626
30% Bioavailability (F30%): 0.957

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.416 Plasma Protein Binding (PPB): 11.60%
Volume Distribution (VD): 0.493 Fu: 79.58%

ADMET: Metabolism

CYP1A2-inhibitor: 0.008 CYP1A2-substrate: 0.024
CYP2C19-inhibitor: 0.007 CYP2C19-substrate: 0.05
CYP2C9-inhibitor: 0.001 CYP2C9-substrate: 0.07
CYP2D6-inhibitor: 0 CYP2D6-substrate: 0.087
CYP3A4-inhibitor: 0.003 CYP3A4-substrate: 0.006

ADMET: Excretion

Clearance (CL): 1.389 Half-life (T1/2): 0.873

ADMET: Toxicity

hERG Blockers: 0.072 Human Hepatotoxicity (H-HT): 0.077
Drug-inuced Liver Injury (DILI): 0.591 AMES Toxicity: 0.058
Rat Oral Acute Toxicity: 0.019 Maximum Recommended Daily Dose: 0.002
Skin Sensitization: 0.068 Carcinogencity: 0.011
Eye Corrosion: 0.003 Eye Irritation: 0.028
Respiratory Toxicity: 0.04
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002398 1.000 D02KFP 0.557
ENC001002 0.875 D09MXS 0.548
ENC001267 0.596 D0P7EK 0.548
ENC000136 0.548 D0VM8K 0.500
ENC000405 0.548 D0T6VD 0.462
ENC001758 0.522 D06HZY 0.413
ENC000161 0.429 D0B8SY 0.341
ENC005982 0.397 D03MGL 0.240
ENC005983 0.397 D04QST 0.200
ENC005901 0.338 D04XDT 0.194
*Note: the compound similarity was calculated by RDKIT.