NPs Basic Information

Name
d-Glycero-l-gluco-heptose
Molecular Formula C7H14O7
IUPAC Name*
(2S,3R,4S,5S,6R)-2,3,4,5,6,7-hexahydroxyheptanal
SMILES
C([C@H]([C@@H]([C@@H]([C@H]([C@@H](C=O)O)O)O)O)O)O
InChI
InChI=1S/C7H14O7/c8-1-3(10)5(12)7(14)6(13)4(11)2-9/h1,3-7,9-14H,2H2/t3-,4-,5+,6+,7-/m1/s1
InChIKey
YPZMPEPLWKRVLD-ULQPCXBYSA-N
Synonyms
d-Glycero-l-gluco-heptose; 23102-92-3; BETA-D-GALACTOHEPTOSE; (2S,3R,4S,5S,6R)-2,3,4,5,6,7-HEXAHYDROXYHEPTANAL; beta-D-Mannoheptose; D-Galactoheptose; SCHEMBL2342352; DTXSID20610968; ZINC13522684; J-200007; W-201971
CAS 23102-92-3
PubChem CID 21139463
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Heptoses

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 210.18 ALogp: -3.6
HBD: 6 HBA: 7
Rotatable Bonds: 6 Lipinski's rule of five: Rejected
Polar Surface Area: 138.0 Aromatic Rings: 0
Heavy Atoms: 14 QED Weighted: 0.241

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.385 MDCK Permeability: 0.00136296
Pgp-inhibitor: 0.011 Pgp-substrate: 0.298
Human Intestinal Absorption (HIA): 0.263 20% Bioavailability (F20%): 0.853
30% Bioavailability (F30%): 0.952

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.567 Plasma Protein Binding (PPB): 13.84%
Volume Distribution (VD): 0.618 Fu: 72.99%

ADMET: Metabolism

CYP1A2-inhibitor: 0.009 CYP1A2-substrate: 0.021
CYP2C19-inhibitor: 0.007 CYP2C19-substrate: 0.051
CYP2C9-inhibitor: 0.001 CYP2C9-substrate: 0.075
CYP2D6-inhibitor: 0 CYP2D6-substrate: 0.091
CYP3A4-inhibitor: 0.002 CYP3A4-substrate: 0.006

ADMET: Excretion

Clearance (CL): 1.317 Half-life (T1/2): 0.818

ADMET: Toxicity

hERG Blockers: 0.077 Human Hepatotoxicity (H-HT): 0.17
Drug-inuced Liver Injury (DILI): 0.866 AMES Toxicity: 0.051
Rat Oral Acute Toxicity: 0.01 Maximum Recommended Daily Dose: 0.004
Skin Sensitization: 0.078 Carcinogencity: 0.002
Eye Corrosion: 0.003 Eye Irritation: 0.035
Respiratory Toxicity: 0.021
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003038 1.000 D02KFP 0.557
ENC001002 0.875 D09MXS 0.548
ENC001267 0.596 D0P7EK 0.548
ENC000405 0.548 D0VM8K 0.500
ENC001758 0.522 D0T6VD 0.462
ENC000161 0.429 D06HZY 0.413
ENC005982 0.397 D0B8SY 0.341
ENC005983 0.397 D03MGL 0.240
ENC005901 0.338 D04QST 0.200
ENC001210 0.314 D04XDT 0.194
*Note: the compound similarity was calculated by RDKIT.