NPs Basic Information

Name
Xylaranol B
Molecular Formula C15H28O3
IUPAC Name*
2-[(3R,3aR,5S,8R,8aS)-8-hydroxy-3,8-dimethyl-2,3,3a,4,5,6,7,8a-octahydro-1H-azulen-5-yl]propane-1,2-diol
SMILES
C[C@@H]1CC[C@H]2[C@@H]1C[C@H](CC[C@@]2(C)O)C(C)(CO)O
InChI
InChI=1S/C15H28O3/c1-10-4-5-13-12(10)8-11(15(3,18)9-16)6-7-14(13,2)17/h10-13,16-18H,4-9H2,1-3H3/t10-,11+,12-,13+,14-,15?/m1/s1
InChIKey
ZMKAVJLNYHOIQP-WQFUOLRDSA-N
Synonyms
Xylaranol B
CAS NA
PubChem CID 46217966
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Guaianes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 256.38 ALogp: 1.8
HBD: 3 HBA: 3
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 60.7 Aromatic Rings: 2
Heavy Atoms: 18 QED Weighted: 0.711

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.478 MDCK Permeability: 0.00001810
Pgp-inhibitor: 0.034 Pgp-substrate: 0.005
Human Intestinal Absorption (HIA): 0.012 20% Bioavailability (F20%): 0.115
30% Bioavailability (F30%): 0.053

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.437 Plasma Protein Binding (PPB): 87.89%
Volume Distribution (VD): 1.005 Fu: 8.96%

ADMET: Metabolism

CYP1A2-inhibitor: 0.042 CYP1A2-substrate: 0.281
CYP2C19-inhibitor: 0.019 CYP2C19-substrate: 0.858
CYP2C9-inhibitor: 0.025 CYP2C9-substrate: 0.184
CYP2D6-inhibitor: 0.003 CYP2D6-substrate: 0.155
CYP3A4-inhibitor: 0.049 CYP3A4-substrate: 0.347

ADMET: Excretion

Clearance (CL): 7.851 Half-life (T1/2): 0.658

ADMET: Toxicity

hERG Blockers: 0.075 Human Hepatotoxicity (H-HT): 0.197
Drug-inuced Liver Injury (DILI): 0.292 AMES Toxicity: 0.006
Rat Oral Acute Toxicity: 0.009 Maximum Recommended Daily Dose: 0.018
Skin Sensitization: 0.794 Carcinogencity: 0.097
Eye Corrosion: 0.128 Eye Irritation: 0.968
Respiratory Toxicity: 0.119
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004727 1.000 D07QKN 0.356
ENC004728 1.000 D0N6FH 0.284
ENC003658 0.661 D0S3WH 0.268
ENC003599 0.661 D0Y5ZA 0.264
ENC003786 0.661 D08PIQ 0.260
ENC003624 0.621 D00VZZ 0.258
ENC004726 0.581 D0SC8F 0.256
ENC004724 0.581 D0U3GL 0.253
ENC004723 0.556 D0Q6NZ 0.253
ENC004725 0.556 D0KR5B 0.253
*Note: the compound similarity was calculated by RDKIT.