NPs Basic Information

Name
Shamixanthone
Molecular Formula C25H26O5
IUPAC Name*
(1R,2S)-1,11-dihydroxy-5-methyl-8-(3-methylbut-2-enyl)-2-prop-1-en-2-yl-2,3-dihydro-1H-pyrano[3,2-a]xanthen-12-one
SMILES
CC1=CC2=C(C3=C1OC[C@@H]([C@H]3O)C(=C)C)C(=O)C4=C(C=CC(=C4O2)CC=C(C)C)O
InChI
InChI=1S/C25H26O5/c1-12(2)6-7-15-8-9-17(26)19-23(28)20-18(30-25(15)19)10-14(5)24-21(20)22(27)16(11-29-24)13(3)4/h6,8-10,16,22,26-27H,3,7,11H2,1-2,4-5H3/t16-,22-/m1/s1
InChIKey
MXGMZMKTWCNKRS-OPAMFIHVSA-N
Synonyms
SHAMIXANTHONE; CHEMBL469860; Z41V59XW4A; 35660-46-9; CHEBI:64499; (1R,2S)-1,11-dihydroxy-5-methyl-8-(3-methylbut-2-en-1-yl)-2-(prop-1-en-2-yl)-2,3-dihydropyrano[3,2-a]xanthen-12(1H)-one; (1R,2S)-1,11-dihydroxy-5-methyl-8-(3-methylbut-2-enyl)-2-prop-1-en-2-yl-2,3-dihydro-1H-pyrano[3,2-a]xanthen-12-one; Pyrano(3,2-a)xanthen-12(1H)-one, 2,3-dihydro-1,11-dihydroxy-5-methyl-8-(3-methyl-2-buten-1-yl)-2-(1-methylethenyl)-, (1R,2S)-; Pyrano(3,2-a)xanthen-12(1H)-one, 2,3-dihydro-1,11-dihydroxy-5-methyl-8-(3-methyl-2-butenyl)-2-(1-methylethenyl)-, (1R-trans)-; UNII-Z41V59XW4A; SCHEMBL3133103; DTXSID201045540; BDBM50242273; Q15427832; 11076-08-7
CAS 35660-46-9
PubChem CID 15596091
ChEMBL ID CHEMBL469860
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: 4-prenylated xanthones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 406.5 ALogp: 5.9
HBD: 2 HBA: 5
Rotatable Bonds: 3 Lipinski's rule of five: Rejected
Polar Surface Area: 76.0 Aromatic Rings: 4
Heavy Atoms: 30 QED Weighted: 0.449

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.837 MDCK Permeability: 0.00001110
Pgp-inhibitor: 0.786 Pgp-substrate: 0.5
Human Intestinal Absorption (HIA): 0.065 20% Bioavailability (F20%): 0.39
30% Bioavailability (F30%): 0.008

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.009 Plasma Protein Binding (PPB): 86.64%
Volume Distribution (VD): 0.932 Fu: 9.68%

ADMET: Metabolism

CYP1A2-inhibitor: 0.702 CYP1A2-substrate: 0.67
CYP2C19-inhibitor: 0.82 CYP2C19-substrate: 0.134
CYP2C9-inhibitor: 0.863 CYP2C9-substrate: 0.893
CYP2D6-inhibitor: 0.632 CYP2D6-substrate: 0.32
CYP3A4-inhibitor: 0.299 CYP3A4-substrate: 0.142

ADMET: Excretion

Clearance (CL): 2.004 Half-life (T1/2): 0.067

ADMET: Toxicity

hERG Blockers: 0.012 Human Hepatotoxicity (H-HT): 0.934
Drug-inuced Liver Injury (DILI): 0.934 AMES Toxicity: 0.531
Rat Oral Acute Toxicity: 0.403 Maximum Recommended Daily Dose: 0.812
Skin Sensitization: 0.504 Carcinogencity: 0.841
Eye Corrosion: 0.003 Eye Irritation: 0.214
Respiratory Toxicity: 0.197
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC006093 0.822 D0Q0PR 0.314
ENC002916 0.822 D0K8KX 0.257
ENC002623 0.766 D0F7CS 0.252
ENC002651 0.724 D0O1UZ 0.250
ENC002697 0.710 D06GCK 0.248
ENC004145 0.657 D04AIT 0.239
ENC002544 0.644 D0O6KE 0.234
ENC004314 0.561 D0W6DG 0.228
ENC002507 0.558 D0R9WP 0.221
ENC004537 0.490 D04TDQ 0.219
*Note: the compound similarity was calculated by RDKIT.