NPs Basic Information

Name
Ambuic acid
Molecular Formula C19H26O6
IUPAC Name*
(E)-4-[(1R,5R,6R)-3-[(E)-hept-1-enyl]-5-hydroxy-4-(hydroxymethyl)-2-oxo-7-oxabicyclo[4.1.0]hept-3-en-1-yl]-2-methylbut-2-enoic acid
SMILES
CCCCC/C=C/C1=C([C@H]([C@@H]2[C@](C1=O)(O2)C/C=C(\C)/C(=O)O)O)CO
InChI
InChI=1S/C19H26O6/c1-3-4-5-6-7-8-13-14(11-20)15(21)17-19(25-17,16(13)22)10-9-12(2)18(23)24/h7-9,15,17,20-21H,3-6,10-11H2,1-2H3,(H,23,24)/b8-7+,12-9+/t15-,17-,19+/m1/s1
InChIKey
UDSQZJMGPSRCEM-HDKVZZTHSA-N
Synonyms
Ambuic acid; 340774-69-8; (2E)-4-[(1R,5R,6R)-3-(1E)-1-Hepten-1-yl-5-hydroxy-4-(hydroxymethyl)-2-oxo-7-oxabicyclo[4.1.0]hept-3-en-1-yl]-2-methyl-2-butenoic acid; (+)-Ambuic Acid; (2E)-4-[(1R,5R,6R)-3-(1E)-1-Hepten-1-yl-5-hydroxy-4-(hydroxymethyl)-2-oxo-7-oxabicyclo[4.1.0]hept-3-en-1-yl]-2-methyl-2-butenoicacid; C19H26O6; CHEMBL562502; SCHEMBL5484601; DTXSID101318126; HB3759; AKOS037435228; (2E,5R,6R,7R,8E,10E)-2-Methyl-5,9-carbonyl-5,6-epoxy-7-hydroxy-8-(hydroxymethyl)-2,8,10-hexadecatrienoic acid; (E)-4-[(1R,5R,6R)-3-[(E)-hept-1-enyl]-5-hydroxy-4-(hydroxymethyl)-2-oxo-7-oxabicyclo[4.1.0]hept-3-en-1-yl]-2-methylbut-2-enoic acid
CAS 340774-69-8
PubChem CID 11152290
ChEMBL ID CHEMBL562502
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty acids and conjugate
          • Direct Parent: Heterocyclic fatty acids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 350.4 ALogp: 2.0
HBD: 3 HBA: 6
Rotatable Bonds: 9 Lipinski's rule of five: Accepted
Polar Surface Area: 107.0 Aromatic Rings: 2
Heavy Atoms: 25 QED Weighted: 0.335

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.932 MDCK Permeability: 0.00002650
Pgp-inhibitor: 0 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.045 20% Bioavailability (F20%): 0.009
30% Bioavailability (F30%): 0.003

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.647 Plasma Protein Binding (PPB): 56.34%
Volume Distribution (VD): 0.83 Fu: 35.86%

ADMET: Metabolism

CYP1A2-inhibitor: 0.01 CYP1A2-substrate: 0.542
CYP2C19-inhibitor: 0.026 CYP2C19-substrate: 0.635
CYP2C9-inhibitor: 0.013 CYP2C9-substrate: 0.315
CYP2D6-inhibitor: 0.006 CYP2D6-substrate: 0.088
CYP3A4-inhibitor: 0.034 CYP3A4-substrate: 0.081

ADMET: Excretion

Clearance (CL): 2.035 Half-life (T1/2): 0.747

ADMET: Toxicity

hERG Blockers: 0.011 Human Hepatotoxicity (H-HT): 0.087
Drug-inuced Liver Injury (DILI): 0.975 AMES Toxicity: 0.03
Rat Oral Acute Toxicity: 0.756 Maximum Recommended Daily Dose: 0.01
Skin Sensitization: 0.538 Carcinogencity: 0.185
Eye Corrosion: 0.984 Eye Irritation: 0.617
Respiratory Toxicity: 0.776
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004331 0.426 D06FEA 0.305
ENC004326 0.396 D0N3NO 0.303
ENC002511 0.396 D0V0IX 0.266
ENC004330 0.392 D09SRR 0.265
ENC004325 0.378 D0I4DQ 0.257
ENC004324 0.371 D0UE9X 0.250
ENC003663 0.365 D07PCI 0.242
ENC002025 0.330 D0O1PH 0.241
ENC002292 0.320 D0H2YX 0.238
ENC004770 0.315 D00HCQ 0.236
*Note: the compound similarity was calculated by RDKIT.