NPs Basic Information

Name
Saptomycin A
Molecular Formula C24H20O6
IUPAC Name*
11-hydroxy-2-[(Z)-3-hydroxyhex-4-en-2-yl]-5-methylnaphtho[2,3-h]chromene-4,7,12-trione
SMILES
C/C=C\C(C(C)C1=CC(=O)C2=C(O1)C3=C(C=C2C)C(=O)C4=C(C3=O)C(=CC=C4)O)O
InChI
InChI=1S/C24H20O6/c1-4-6-15(25)12(3)18-10-17(27)19-11(2)9-14-21(24(19)30-18)23(29)20-13(22(14)28)7-5-8-16(20)26/h4-10,12,15,25-26H,1-3H3/b6-4-
InChIKey
CRCKMDDPCOAZQX-XQRVVYSFSA-N
Synonyms
Saptomycin A
CAS NA
PubChem CID 10250632
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Benzenoids
      • Class: Anthracenes
        • Subclass: Anthraquinones
          • Direct Parent: Anthraquinones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 404.4 ALogp: 3.9
HBD: 2 HBA: 6
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 101.0 Aromatic Rings: 4
Heavy Atoms: 30 QED Weighted: 0.492

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.915 MDCK Permeability: 0.00001310
Pgp-inhibitor: 0.021 Pgp-substrate: 0.951
Human Intestinal Absorption (HIA): 0.109 20% Bioavailability (F20%): 0.045
30% Bioavailability (F30%): 0.999

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.032 Plasma Protein Binding (PPB): 99.18%
Volume Distribution (VD): 0.344 Fu: 1.03%

ADMET: Metabolism

CYP1A2-inhibitor: 0.681 CYP1A2-substrate: 0.861
CYP2C19-inhibitor: 0.302 CYP2C19-substrate: 0.074
CYP2C9-inhibitor: 0.719 CYP2C9-substrate: 0.701
CYP2D6-inhibitor: 0.235 CYP2D6-substrate: 0.191
CYP3A4-inhibitor: 0.41 CYP3A4-substrate: 0.206

ADMET: Excretion

Clearance (CL): 3.002 Half-life (T1/2): 0.172

ADMET: Toxicity

hERG Blockers: 0.007 Human Hepatotoxicity (H-HT): 0.607
Drug-inuced Liver Injury (DILI): 0.972 AMES Toxicity: 0.887
Rat Oral Acute Toxicity: 0.357 Maximum Recommended Daily Dose: 0.813
Skin Sensitization: 0.146 Carcinogencity: 0.964
Eye Corrosion: 0.003 Eye Irritation: 0.371
Respiratory Toxicity: 0.084
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005570 0.780 D0N1FS 0.336
ENC005571 0.705 D06GCK 0.280
ENC001964 0.691 D0O6KE 0.275
ENC005573 0.535 D04AIT 0.261
ENC000337 0.489 D01XWG 0.259
ENC005572 0.476 D00PEH 0.252
ENC000087 0.404 D01UBX 0.249
ENC004888 0.404 D0H1AR 0.248
ENC001111 0.387 D0G7IY 0.246
ENC000966 0.382 D06NSS 0.246
*Note: the compound similarity was calculated by RDKIT.