NPs Basic Information

Name
Pyrenocine A
Molecular Formula C11H12O4
IUPAC Name*
5-[(E)-but-2-enoyl]-4-methoxy-6-methylpyran-2-one
SMILES
C/C=C/C(=O)C1=C(OC(=O)C=C1OC)C
InChI
InChI=1S/C11H12O4/c1-4-5-8(12)11-7(2)15-10(13)6-9(11)14-3/h4-6H,1-3H3/b5-4+
InChIKey
VVYCRPVWBIEKIW-SNAWJCMRSA-N
Synonyms
Pyrenocine A; Pyrenocin A; 76868-97-8; 5-[(E)-but-2-enoyl]-4-methoxy-6-methylpyran-2-one; Pyrenocin A putative; 3M9PWU4VLX; CHEMBL4452052; DTXSID801017472; 5-crotonoyl-4-methoxy-6-methyl-pyrone; 2H-Pyran-2-one, 4-methoxy-6-methyl-5-(1-oxo-2-butenyl)-, (E)-; 4-Methoxy-6-methyl-5-[(2E)-1-oxo-2-buten-1-yl]-2H-pyran-2-one; 2H-Pyran-2-one, 4-methoxy-6-methyl-5-[(2E)-1-oxo-2-buten-1-yl]-
CAS 76868-97-8
PubChem CID 6312351
ChEMBL ID CHEMBL4452052
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbonyl compounds
          • Direct Parent: Aryl ketones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 208.21 ALogp: 1.1
HBD: 0 HBA: 4
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 52.6 Aromatic Rings: 1
Heavy Atoms: 15 QED Weighted: 0.565

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.572 MDCK Permeability: 0.00002050
Pgp-inhibitor: 0.002 Pgp-substrate: 0.004
Human Intestinal Absorption (HIA): 0.008 20% Bioavailability (F20%): 0.005
30% Bioavailability (F30%): 0.987

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.129 Plasma Protein Binding (PPB): 79.22%
Volume Distribution (VD): 0.99 Fu: 15.97%

ADMET: Metabolism

CYP1A2-inhibitor: 0.944 CYP1A2-substrate: 0.948
CYP2C19-inhibitor: 0.242 CYP2C19-substrate: 0.531
CYP2C9-inhibitor: 0.043 CYP2C9-substrate: 0.78
CYP2D6-inhibitor: 0.026 CYP2D6-substrate: 0.812
CYP3A4-inhibitor: 0.053 CYP3A4-substrate: 0.38

ADMET: Excretion

Clearance (CL): 10.791 Half-life (T1/2): 0.744

ADMET: Toxicity

hERG Blockers: 0.033 Human Hepatotoxicity (H-HT): 0.606
Drug-inuced Liver Injury (DILI): 0.42 AMES Toxicity: 0.412
Rat Oral Acute Toxicity: 0.88 Maximum Recommended Daily Dose: 0.215
Skin Sensitization: 0.631 Carcinogencity: 0.889
Eye Corrosion: 0.654 Eye Irritation: 0.984
Respiratory Toxicity: 0.976
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005955 1.000 D05QDC 0.253
ENC005954 0.600 D0T3NY 0.246
ENC005957 0.560 D0B1IP 0.236
ENC006029 0.545 D0E6OC 0.230
ENC005956 0.545 D0E9CD 0.228
ENC003263 0.509 D0FA2O 0.225
ENC003262 0.444 D0G4KG 0.224
ENC005634 0.431 D08VYV 0.221
ENC001413 0.400 D03LGG 0.217
ENC001650 0.400 D0U5CE 0.217
*Note: the compound similarity was calculated by RDKIT.