NPs Basic Information

Name
5-Methylenecycloocta-1,3-diene
Molecular Formula C9H12
IUPAC Name*
(1Z,3Z)-5-methylidenecycloocta-1,3-diene
SMILES
C=C\1CCC/C=C\C=C1
InChI
InChI=1S/C9H12/c1-9-7-5-3-2-4-6-8-9/h2-3,5,7H,1,4,6,8H2/b3-2-,7-5-
InChIKey
MZFUKBSFQUPEFP-ZSBGFAJOSA-N
Synonyms
5-Methylenecycloocta-1,3-diene; 5-Methylene-1,3-cyclooctadiene #; (1E,3Z)-5-Methylene-1,3-cyclooctadiene; (1Z,3E)-5-Methylene-1,3-cyclooctadiene
CAS NA
PubChem CID 5368365
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Unsaturated hydrocarbons
        • Subclass: Branched unsaturated hydr
          • Direct Parent: Branched unsaturated hydr

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 120.19 ALogp: 3.1
HBD: 0 HBA: 0
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 0.0 Aromatic Rings: 1
Heavy Atoms: 9 QED Weighted: 0.458

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.174 MDCK Permeability: 0.00002340
Pgp-inhibitor: 0.009 Pgp-substrate: 0
Human Intestinal Absorption (HIA): 0.007 20% Bioavailability (F20%): 0.308
30% Bioavailability (F30%): 0.91

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.495 Plasma Protein Binding (PPB): 85.94%
Volume Distribution (VD): 1.839 Fu: 12.06%

ADMET: Metabolism

CYP1A2-inhibitor: 0.934 CYP1A2-substrate: 0.271
CYP2C19-inhibitor: 0.297 CYP2C19-substrate: 0.705
CYP2C9-inhibitor: 0.038 CYP2C9-substrate: 0.03
CYP2D6-inhibitor: 0.05 CYP2D6-substrate: 0.084
CYP3A4-inhibitor: 0.187 CYP3A4-substrate: 0.266

ADMET: Excretion

Clearance (CL): 12.027 Half-life (T1/2): 0.699

ADMET: Toxicity

hERG Blockers: 0.027 Human Hepatotoxicity (H-HT): 0.695
Drug-inuced Liver Injury (DILI): 0.658 AMES Toxicity: 0.611
Rat Oral Acute Toxicity: 0.729 Maximum Recommended Daily Dose: 0.937
Skin Sensitization: 0.949 Carcinogencity: 0.634
Eye Corrosion: 0.784 Eye Irritation: 0.983
Respiratory Toxicity: 0.941
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002843 0.333 D05QIM 0.173
ENC000383 0.262 D0E6YQ 0.167
ENC000252 0.257 D0MP5H 0.167
ENC001723 0.250 D02DPU 0.164
ENC000345 0.233 D0UM7O 0.164
ENC003475 0.226 D05IHU 0.164
ENC005597 0.220 D0ZX1P 0.152
ENC003085 0.216 D07TGY 0.149
ENC003836 0.215 D0TY5N 0.145
ENC003473 0.215 D01JMC 0.145
*Note: the compound similarity was calculated by RDKIT.