NPs Basic Information

Name
Sphinganine
Molecular Formula C18H39NO2
IUPAC Name*
(2S,3R)-2-aminooctadecane-1,3-diol
SMILES
CCCCCCCCCCCCCCC[C@H]([C@H](CO)N)O
InChI
InChI=1S/C18H39NO2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-18(21)17(19)16-20/h17-18,20-21H,2-16,19H2,1H3/t17-,18+/m0/s1
InChIKey
OTKJDMGTUTTYMP-ZWKOTPCHSA-N
Synonyms
Sphinganine; Octadecasphinganine; Dihydrosphingosine; D-erythro-Sphinganine; 764-22-7; C18-Dihydrosphingosine; D-erythro-Dihydrosphingosine; (2S,3R)-2-aminooctadecane-1,3-diol; D-erythro-2-Amino-1,3-octadecanediol; D-erythro-C18-Dihydrosphingosine; Dihydro-C18-sphingosine; D-erythro-1,3-Dihydroxy-2-aminooctadecane; erythro-Sphinganine; SPC 102860; C18-Sphingosine, dihydro-; 1,3-Octadecanediol, 2-amino-, (2S,3R)-; (2S,3R)-2-amino-1,3-octadecanediol; 1,3-Octadecanediol, 2-amino-, D-erythro-; (R-(R*,S*))-2-Aminooctadecane-1,3-diol; YT0ZSD64HM; 1,3-Octadecanediol, 2-amino-, (R-(R*,S*))-; CHEMBL448741; D-erythro-Dihydro-D-sphingosine; CHEBI:16566; 2-Amino-1,3-dihydroxyoctadecane; C18-sphinganine; D-erythro-C18-Dihydro-D-sphingosine; 1,3-Octadecanediol, 2-amino-, [R-(R*,S*)]-; d18:0; Sphinganine (d18:0); 3102-56-5; EINECS 212-116-0; UNII-YT0ZSD64HM; dihydro-D-erythrosphingosine; D-erythro-DHS; DIHYDROSPINGOSINE; Tocris-0749; C18-dihydro-Sphingosine; SPHINGANINE [INCI]; cid_3126; CBiol_002042; SCHEMBL40592; BSPBio_001288; KBioGR_000008; KBioSS_000008; Dihydro-D-erythro-Sphingosine; MLS001066334; (+)-erythro-dihydrosphingosine; BML3-D04; GTPL2453; Dihydrosphingosine (sphinganine); BCBcMAP01_000225; KBio2_000008; KBio2_002576; KBio2_005144; KBio3_000015; KBio3_000016; Bio1_000328; Bio1_000817; Bio1_001306; Bio2_000008; Bio2_000488; D-erythro-Sphinganine, C18 chain; DTXSID501016568; HMS1361A10; HMS1791A10; HMS1989A10; HMS2232G12; HMS3402A10; ZINC8036012; BDBM50244355; LMSP01020001; AKOS037645439; D-erythro-Dihydrosphingosine, >=98%; 2-amino-D-erythro-1,3-Octadecanediol; HY-W019838; IDI1_033758; NCGC00024767-01; NCGC00024767-02; NCGC00024767-03; NCGC00024767-04; AS-60774; SMR000471878; [R-(R*,S*)]-2-amino-1,3-Octadecanediol; CS-0031629; C00836; SR-01000597679; 1,3-Octadecanediol, 2-amino-, D-erythro- (8CI); Sphinganine (d18:0), D-erythro-sphinganine, powder; SR-01000597679-1; 1,3-Octadecanediol, 2-amino-, (2S,3R)- (9CI); Q27088847; 82E0B6E3-6AE1-425F-A39E-5BED56511028
CAS 764-22-7
PubChem CID 91486
ChEMBL ID CHEMBL448741
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic nitrogen compound
      • Class: Organonitrogen compounds
        • Subclass: Amines
          • Direct Parent: 1,2-aminoalcohols

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 301.5 ALogp: 5.8
HBD: 3 HBA: 3
Rotatable Bonds: 16 Lipinski's rule of five: Rejected
Polar Surface Area: 66.5 Aromatic Rings: 0
Heavy Atoms: 21 QED Weighted: 0.361

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.153 MDCK Permeability: 0.00003040
Pgp-inhibitor: 0.001 Pgp-substrate: 0.969
Human Intestinal Absorption (HIA): 0.097 20% Bioavailability (F20%): 0.606
30% Bioavailability (F30%): 0.928

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.019 Plasma Protein Binding (PPB): 96.79%
Volume Distribution (VD): 0.772 Fu: 2.46%

ADMET: Metabolism

CYP1A2-inhibitor: 0.344 CYP1A2-substrate: 0.23
CYP2C19-inhibitor: 0.248 CYP2C19-substrate: 0.058
CYP2C9-inhibitor: 0.09 CYP2C9-substrate: 0.378
CYP2D6-inhibitor: 0.592 CYP2D6-substrate: 0.489
CYP3A4-inhibitor: 0.261 CYP3A4-substrate: 0.066

ADMET: Excretion

Clearance (CL): 5.351 Half-life (T1/2): 0.189

ADMET: Toxicity

hERG Blockers: 0.298 Human Hepatotoxicity (H-HT): 0.115
Drug-inuced Liver Injury (DILI): 0.043 AMES Toxicity: 0.009
Rat Oral Acute Toxicity: 0.063 Maximum Recommended Daily Dose: 0.015
Skin Sensitization: 0.943 Carcinogencity: 0.057
Eye Corrosion: 0.976 Eye Irritation: 0.936
Respiratory Toxicity: 0.945
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000781 0.758 D07ILQ 0.587
ENC001159 0.714 D00AOJ 0.537
ENC000426 0.694 D0Z5SM 0.507
ENC000515 0.692 D0O1PH 0.471
ENC000082 0.688 D00FGR 0.457
ENC000489 0.667 D05ATI 0.432
ENC001528 0.662 D0P1RL 0.383
ENC000488 0.662 D0T9TJ 0.365
ENC000486 0.657 D00STJ 0.352
ENC000666 0.653 D0XN8C 0.311
*Note: the compound similarity was calculated by RDKIT.