NPs Basic Information

Name
Xylariaopyrone E
Molecular Formula C13H16O5
IUPAC Name*
4-methoxy-6-(3-methyl-2,8-dioxabicyclo[3.2.1]octan-1-yl)pyran-2-one
SMILES
COc1cc(C23CCC(CC(C)O2)O3)oc(=O)c1
InChI
InChI=1S/C13H16O5/c1-8-5-9-3-4-13(17-8,18-9)11-6-10(15-2)7-12(14)16-11/h6-9H,3-5H2,1-2H3/t8-,9-,13-/m1/s1
InChIKey
XGMWTJTUFKVGNT-JRKPZEMJSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Oxepanes
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Oxepanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 252.27 ALogp: 1.8
HBD: 0 HBA: 5
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 57.9 Aromatic Rings: 3
Heavy Atoms: 18 QED Weighted: 0.808

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.647 MDCK Permeability: 0.00003710
Pgp-inhibitor: 0.907 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.004 20% Bioavailability (F20%): 0.009
30% Bioavailability (F30%): 0.963

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.243 Plasma Protein Binding (PPB): 51.17%
Volume Distribution (VD): 1.387 Fu: 18.15%

ADMET: Metabolism

CYP1A2-inhibitor: 0.053 CYP1A2-substrate: 0.927
CYP2C19-inhibitor: 0.116 CYP2C19-substrate: 0.911
CYP2C9-inhibitor: 0.042 CYP2C9-substrate: 0.202
CYP2D6-inhibitor: 0.006 CYP2D6-substrate: 0.89
CYP3A4-inhibitor: 0.036 CYP3A4-substrate: 0.712

ADMET: Excretion

Clearance (CL): 14.845 Half-life (T1/2): 0.563

ADMET: Toxicity

hERG Blockers: 0.026 Human Hepatotoxicity (H-HT): 0.604
Drug-inuced Liver Injury (DILI): 0.556 AMES Toxicity: 0.45
Rat Oral Acute Toxicity: 0.206 Maximum Recommended Daily Dose: 0.66
Skin Sensitization: 0.421 Carcinogencity: 0.881
Eye Corrosion: 0.059 Eye Irritation: 0.597
Respiratory Toxicity: 0.106
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC006020 0.486 D09OBB 0.239
ENC002869 0.377 D0X5KF 0.226
ENC006021 0.375 D05GKD 0.224
ENC005762 0.363 D0J1ML 0.221
ENC002315 0.344 D0K7LU 0.220
ENC002738 0.344 D0A2AJ 0.217
ENC002737 0.333 D03SKD 0.208
ENC005763 0.329 D0R9VR 0.207
ENC002656 0.328 D0S3WH 0.202
ENC002736 0.324 D0L1JW 0.202
*Note: the compound similarity was calculated by RDKIT.