NPs Basic Information

Name
5, 7-Dihydroxy-3-hydroxymethyl-2-methylchromone
Molecular Formula C11H10O5
IUPAC Name*
5,7-dihydroxy-3-(hydroxymethyl)-2-methylchromen-4-one
SMILES
Cc1oc2cc(O)cc(O)c2c(=O)c1CO
InChI
InChI=1S/C11H10O5/c1-5-7(4-12)11(15)10-8(14)2-6(13)3-9(10)16-5/h2-3,12-14H,4H2,1H3
InChIKey
JTVXUEYEPGRLSS-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Chromones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 222.2 ALogp: 1.0
HBD: 3 HBA: 5
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 90.9 Aromatic Rings: 2
Heavy Atoms: 16 QED Weighted: 0.679

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.876 MDCK Permeability: 0.00000850
Pgp-inhibitor: 0.001 Pgp-substrate: 0.806
Human Intestinal Absorption (HIA): 0.014 20% Bioavailability (F20%): 0.049
30% Bioavailability (F30%): 0.793

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.022 Plasma Protein Binding (PPB): 79.84%
Volume Distribution (VD): 0.813 Fu: 35.34%

ADMET: Metabolism

CYP1A2-inhibitor: 0.908 CYP1A2-substrate: 0.877
CYP2C19-inhibitor: 0.056 CYP2C19-substrate: 0.063
CYP2C9-inhibitor: 0.071 CYP2C9-substrate: 0.835
CYP2D6-inhibitor: 0.203 CYP2D6-substrate: 0.4
CYP3A4-inhibitor: 0.076 CYP3A4-substrate: 0.162

ADMET: Excretion

Clearance (CL): 6.681 Half-life (T1/2): 0.948

ADMET: Toxicity

hERG Blockers: 0.008 Human Hepatotoxicity (H-HT): 0.081
Drug-inuced Liver Injury (DILI): 0.681 AMES Toxicity: 0.492
Rat Oral Acute Toxicity: 0.048 Maximum Recommended Daily Dose: 0.111
Skin Sensitization: 0.586 Carcinogencity: 0.026
Eye Corrosion: 0.054 Eye Irritation: 0.951
Respiratory Toxicity: 0.138
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002335 0.712 D0K8KX 0.431
ENC005902 0.559 D04AIT 0.403
ENC002942 0.534 D07MGA 0.300
ENC001574 0.532 D06GCK 0.273
ENC002024 0.516 D07MUN 0.267
ENC002018 0.516 D07EXH 0.264
ENC003365 0.500 D02UFG 0.239
ENC001763 0.500 D0YH0N 0.238
ENC001951 0.500 D0FA2O 0.233
ENC001652 0.484 D0M8RC 0.232
*Note: the compound similarity was calculated by RDKIT.