NPs Basic Information

Name
phomopchalasin C6
Molecular Formula C28H37NO4
IUPAC Name*
16-benzyl-2,5-dihydroxy-5,7,13,14-tetramethyl-17-azatricyclo[9.7.0.01,15]octadeca-3,9-diene-12,18-dione
SMILES
CC1CC=CC2C(=O)C(C)C(C)C3C(Cc4ccccc4)NC(=O)C23C(O)C=CC(C)(O)C1
InChI
InChI=1S/C28H37NO4/c1-17-9-8-12-21-25(31)19(3)18(2)24-22(15-20-10-6-5-7-11-20)29-26(32)28(21,24)23(30)13-14-27(4,33)16-17/h5-8,10-14,17-19,21-24,30,33H,9,15-16H2,1-4H3,(H,29,32)/b12-8+,14-13+/t17-,18+,19+,21-,22-,23+,24-,27-,28+/m0/s1
InChIKey
BVZGNVUHWMGIOI-GKDAOKMESA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Alkaloids and derivatives
      • Class: Cytochalasans
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Cytochalasans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 451.61 ALogp: 3.5
HBD: 3 HBA: 4
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 86.6 Aromatic Rings: 4
Heavy Atoms: 33 QED Weighted: 0.588

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.819 MDCK Permeability: 0.00014430
Pgp-inhibitor: 0.004 Pgp-substrate: 0.006
Human Intestinal Absorption (HIA): 0.035 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.001

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.975 Plasma Protein Binding (PPB): 94.39%
Volume Distribution (VD): 1.741 Fu: 4.70%

ADMET: Metabolism

CYP1A2-inhibitor: 0.021 CYP1A2-substrate: 0.489
CYP2C19-inhibitor: 0.254 CYP2C19-substrate: 0.788
CYP2C9-inhibitor: 0.227 CYP2C9-substrate: 0.336
CYP2D6-inhibitor: 0.012 CYP2D6-substrate: 0.148
CYP3A4-inhibitor: 0.939 CYP3A4-substrate: 0.552

ADMET: Excretion

Clearance (CL): 11.015 Half-life (T1/2): 0.06

ADMET: Toxicity

hERG Blockers: 0.012 Human Hepatotoxicity (H-HT): 0.049
Drug-inuced Liver Injury (DILI): 0.799 AMES Toxicity: 0.009
Rat Oral Acute Toxicity: 0.899 Maximum Recommended Daily Dose: 0.586
Skin Sensitization: 0.044 Carcinogencity: 0.05
Eye Corrosion: 0.003 Eye Irritation: 0.007
Respiratory Toxicity: 0.933
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004243 0.733 D06CWH 0.275
ENC003170 0.704 D0V3ZA 0.266
ENC005131 0.673 D0SP3D 0.266
ENC003169 0.670 D01TSI 0.259
ENC005133 0.670 D09NNH 0.259
ENC004468 0.667 D0D7KC 0.254
ENC004918 0.652 D0W7RJ 0.252
ENC004544 0.652 D0I0DL 0.250
ENC005761 0.640 D0Z9NZ 0.248
ENC001922 0.635 D0R1BD 0.242
*Note: the compound similarity was calculated by RDKIT.