NPs Basic Information

Name
phomopchalasin C5
Molecular Formula C28H39NO5
IUPAC Name*
16-benzyl-2,5,12,14-tetrahydroxy-5,7,13,14-tetramethyl-17-azatricyclo[9.7.0.01,15]octadeca-3,9-dien-18-one
SMILES
CC1CC=CC2C(O)C(C)C(C)(O)C3C(Cc4ccccc4)NC(=O)C23C(O)C=CC(C)(O)C1
InChI
InChI=1S/C28H39NO5/c1-17-9-8-12-20-23(31)18(2)27(4,34)24-21(15-19-10-6-5-7-11-19)29-25(32)28(20,24)22(30)13-14-26(3,33)16-17/h5-8,10-14,17-18,20-24,30-31,33-34H,9,15-16H2,1-4H3,(H,29,32)/b12-8+,14-13+/t17-,18+,20-,21-,22+,23+,24+,26-,27-,28+/m0/s1
InChIKey
IWNYMETYLRNJJP-OBVCYBSZSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Alkaloids and derivatives
      • Class: Cytochalasans
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Cytochalasans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 469.62 ALogp: 2.4
HBD: 5 HBA: 5
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 110.0 Aromatic Rings: 4
Heavy Atoms: 34 QED Weighted: 0.428

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.052 MDCK Permeability: 0.00015684
Pgp-inhibitor: 0.003 Pgp-substrate: 0.027
Human Intestinal Absorption (HIA): 0.352 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.003

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.948 Plasma Protein Binding (PPB): 86.60%
Volume Distribution (VD): 1.524 Fu: 20.82%

ADMET: Metabolism

CYP1A2-inhibitor: 0.01 CYP1A2-substrate: 0.245
CYP2C19-inhibitor: 0.044 CYP2C19-substrate: 0.796
CYP2C9-inhibitor: 0.033 CYP2C9-substrate: 0.717
CYP2D6-inhibitor: 0.008 CYP2D6-substrate: 0.149
CYP3A4-inhibitor: 0.766 CYP3A4-substrate: 0.374

ADMET: Excretion

Clearance (CL): 5.422 Half-life (T1/2): 0.046

ADMET: Toxicity

hERG Blockers: 0.019 Human Hepatotoxicity (H-HT): 0.038
Drug-inuced Liver Injury (DILI): 0.035 AMES Toxicity: 0.014
Rat Oral Acute Toxicity: 0.497 Maximum Recommended Daily Dose: 0.433
Skin Sensitization: 0.025 Carcinogencity: 0.032
Eye Corrosion: 0.003 Eye Irritation: 0.005
Respiratory Toxicity: 0.715
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003170 0.824 D06CWH 0.272
ENC005133 0.732 D05VQI 0.244
ENC004243 0.720 D0SP3D 0.242
ENC003169 0.704 D0V3ZA 0.241
ENC002261 0.687 D0R1BD 0.238
ENC003653 0.687 D0I0DL 0.237
ENC005132 0.673 D03IKT 0.235
ENC004544 0.626 D0F1EX 0.235
ENC004918 0.626 D09NNH 0.235
ENC002762 0.622 D01TSI 0.234
*Note: the compound similarity was calculated by RDKIT.