NPs Basic Information

Name
phomopchalasin C2
Molecular Formula C27H34N2O4
IUPAC Name*
6-amino-4-benzyl-17,18-dihydroxy-7,13,15-trimethyl-10-oxa-3-azapentacyclo[13.2.2.01,5.08,19.011,18]nonadeca-6,14-dien-2-one
SMILES
CC1=CC(C)CC2OC3C(C)=C(N)C4C(Cc5ccccc5)NC(=O)C45C(O)C(O)C1C2C35
InChI
InChI=1S/C27H34N2O4/c1-12-9-13(2)18-19-17(10-12)33-24-14(3)22(28)20-16(11-15-7-5-4-6-8-15)29-26(32)27(20,21(19)24)25(31)23(18)30/h4-9,12,16-21,23-25,30-31H,10-11,28H2,1-3H3,(H,29,32)/t12-,16+,17-,18+,19+,20-,21+,23-,24+,25-,27-/m1/s1
InChIKey
JWQRTUMKGRZDKN-BZMOPKPVSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Azaspirodecane derivative
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Azaspirodecane derivative

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 450.58 ALogp: 1.9
HBD: 4 HBA: 5
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 104.8 Aromatic Rings: 6
Heavy Atoms: 33 QED Weighted: 0.519

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.09 MDCK Permeability: 0.00010861
Pgp-inhibitor: 0 Pgp-substrate: 0.303
Human Intestinal Absorption (HIA): 0.39 20% Bioavailability (F20%): 0.075
30% Bioavailability (F30%): 0.022

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.237 Plasma Protein Binding (PPB): 94.49%
Volume Distribution (VD): 2.204 Fu: 4.54%

ADMET: Metabolism

CYP1A2-inhibitor: 0.011 CYP1A2-substrate: 0.155
CYP2C19-inhibitor: 0.026 CYP2C19-substrate: 0.772
CYP2C9-inhibitor: 0.017 CYP2C9-substrate: 0.108
CYP2D6-inhibitor: 0.008 CYP2D6-substrate: 0.265
CYP3A4-inhibitor: 0.572 CYP3A4-substrate: 0.55

ADMET: Excretion

Clearance (CL): 10.475 Half-life (T1/2): 0.026

ADMET: Toxicity

hERG Blockers: 0.019 Human Hepatotoxicity (H-HT): 0.465
Drug-inuced Liver Injury (DILI): 0.457 AMES Toxicity: 0.025
Rat Oral Acute Toxicity: 0.97 Maximum Recommended Daily Dose: 0.792
Skin Sensitization: 0.029 Carcinogencity: 0.04
Eye Corrosion: 0.003 Eye Irritation: 0.005
Respiratory Toxicity: 0.954
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005127 0.784 D0SP3D 0.230
ENC003936 0.752 D09NNH 0.229
ENC003956 0.611 D0V3ZA 0.229
ENC006060 0.545 D0IN7I 0.226
ENC004543 0.508 D01XDL 0.226
ENC003937 0.488 D02PAH 0.222
ENC004368 0.472 D01TSI 0.222
ENC005129 0.472 D0R1BD 0.220
ENC005130 0.472 D05ZJG 0.217
ENC005758 0.460 D0M6VK 0.217
*Note: the compound similarity was calculated by RDKIT.