NPs Basic Information

Name
(3R)-nordinone
Molecular Formula C18H24O5
IUPAC Name*
16,18-dihydroxy-4-methyl-3-oxabicyclo[12.4.0]octadeca-1(14),15,17-triene-2,12-dione
SMILES
CC1CCCCCCCC(=O)Cc2cc(O)cc(O)c2C(=O)O1
InChI
InChI=1S/C18H24O5/c1-12-7-5-3-2-4-6-8-14(19)9-13-10-15(20)11-16(21)17(13)18(22)23-12/h10-12,20-21H,2-9H2,1H3/t12-/m1/s1
InChIKey
JBVLZTRASUVBJM-GFCCVEGCSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Macrolides and analogues
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Macrolides and analogues

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 320.38 ALogp: 3.5
HBD: 2 HBA: 5
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 83.8 Aromatic Rings: 2
Heavy Atoms: 23 QED Weighted: 0.699

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.819 MDCK Permeability: 0.00002890
Pgp-inhibitor: 0.007 Pgp-substrate: 0.076
Human Intestinal Absorption (HIA): 0.011 20% Bioavailability (F20%): 0.99
30% Bioavailability (F30%): 0.448

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.173 Plasma Protein Binding (PPB): 95.64%
Volume Distribution (VD): 0.574 Fu: 3.25%

ADMET: Metabolism

CYP1A2-inhibitor: 0.874 CYP1A2-substrate: 0.397
CYP2C19-inhibitor: 0.836 CYP2C19-substrate: 0.063
CYP2C9-inhibitor: 0.669 CYP2C9-substrate: 0.971
CYP2D6-inhibitor: 0.882 CYP2D6-substrate: 0.423
CYP3A4-inhibitor: 0.677 CYP3A4-substrate: 0.116

ADMET: Excretion

Clearance (CL): 13.293 Half-life (T1/2): 0.927

ADMET: Toxicity

hERG Blockers: 0.016 Human Hepatotoxicity (H-HT): 0.143
Drug-inuced Liver Injury (DILI): 0.816 AMES Toxicity: 0.067
Rat Oral Acute Toxicity: 0.165 Maximum Recommended Daily Dose: 0.528
Skin Sensitization: 0.643 Carcinogencity: 0.03
Eye Corrosion: 0.009 Eye Irritation: 0.399
Respiratory Toxicity: 0.715
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002297 0.818 D07GRH 0.277
ENC005003 0.818 D07MGA 0.276
ENC003318 0.795 D0P6VV 0.264
ENC001527 0.775 D00ZFP 0.247
ENC003871 0.694 D03YVO 0.243
ENC001430 0.694 D04JHN 0.240
ENC003872 0.694 D0T3HY 0.240
ENC005002 0.694 D0PG8O 0.239
ENC002298 0.640 D0L9ZR 0.236
ENC005005 0.640 D02NSF 0.235
*Note: the compound similarity was calculated by RDKIT.