NPs Basic Information

Name
(R)-2,3-dihydro-2,5-dihydroxy-2-methylchromen-4-one
Molecular Formula C9H14O4
IUPAC Name*
methyl2,4-dihydroxy-6-methylcyclohexene-1-carboxylate
SMILES
COC(=O)C1=C(O)CC(O)CC1C
InChI
InChI=1S/C9H14O4/c1-5-3-6(10)4-7(11)8(5)9(12)13-2/h5-6,10-11H,3-4H2,1-2H3
InChIKey
XPEZPTJDFINTRS-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Vinylogous acids
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Vinylogous acids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 186.21 ALogp: 0.8
HBD: 2 HBA: 4
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 66.8 Aromatic Rings: 1
Heavy Atoms: 13 QED Weighted: 0.603

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.498 MDCK Permeability: 0.00045690
Pgp-inhibitor: 0 Pgp-substrate: 0.085
Human Intestinal Absorption (HIA): 0.011 20% Bioavailability (F20%): 0.005
30% Bioavailability (F30%): 0.03

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.544 Plasma Protein Binding (PPB): 18.21%
Volume Distribution (VD): 0.947 Fu: 78.51%

ADMET: Metabolism

CYP1A2-inhibitor: 0.019 CYP1A2-substrate: 0.632
CYP2C19-inhibitor: 0.02 CYP2C19-substrate: 0.872
CYP2C9-inhibitor: 0.003 CYP2C9-substrate: 0.114
CYP2D6-inhibitor: 0.002 CYP2D6-substrate: 0.217
CYP3A4-inhibitor: 0.014 CYP3A4-substrate: 0.383

ADMET: Excretion

Clearance (CL): 9.327 Half-life (T1/2): 0.891

ADMET: Toxicity

hERG Blockers: 0.006 Human Hepatotoxicity (H-HT): 0.341
Drug-inuced Liver Injury (DILI): 0.317 AMES Toxicity: 0.013
Rat Oral Acute Toxicity: 0.133 Maximum Recommended Daily Dose: 0.097
Skin Sensitization: 0.074 Carcinogencity: 0.036
Eye Corrosion: 0.169 Eye Irritation: 0.574
Respiratory Toxicity: 0.04
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003701 0.351 D0Z4BV 0.212
ENC002061 0.333 D06WTZ 0.200
ENC005061 0.318 D01JGV 0.198
ENC003237 0.302 D0U7GP 0.198
ENC004882 0.298 D0H0ND 0.196
ENC005941 0.290 D0U0OT 0.194
ENC000729 0.283 D0P0HT 0.191
ENC004916 0.276 D08PIQ 0.189
ENC001043 0.273 D04CSZ 0.189
ENC004403 0.263 D05VQI 0.187
*Note: the compound similarity was calculated by RDKIT.