NPs Basic Information

Name
cladoscyclitol A
Molecular Formula C12H20O5
IUPAC Name*
5-(hydroxymethyl)-6-pent-1-enylcyclohex-5-ene-1,2,3,4-tetrol
SMILES
CCCC=CC1=C(CO)C(O)C(O)C(O)C1O
InChI
InChI=1S/C12H20O5/c1-2-3-4-5-7-8(6-13)10(15)12(17)11(16)9(7)14/h4-5,9-17H,2-3,6H2,1H3/b5-4+/t9-,10-,11+,12+/m1/s1
InChIKey
JTHYSQZPWXZTJT-JVZIUPTQSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Alcohols and polyols
          • Direct Parent: Cyclitols and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 244.29 ALogp: -0.9
HBD: 5 HBA: 5
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 101.2 Aromatic Rings: 1
Heavy Atoms: 17 QED Weighted: 0.462

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.001 MDCK Permeability: 0.00073104
Pgp-inhibitor: 0 Pgp-substrate: 0.097
Human Intestinal Absorption (HIA): 0.895 20% Bioavailability (F20%): 0.005
30% Bioavailability (F30%): 0.166

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.755 Plasma Protein Binding (PPB): 31.19%
Volume Distribution (VD): 0.781 Fu: 54.44%

ADMET: Metabolism

CYP1A2-inhibitor: 0.06 CYP1A2-substrate: 0.04
CYP2C19-inhibitor: 0.015 CYP2C19-substrate: 0.48
CYP2C9-inhibitor: 0.001 CYP2C9-substrate: 0.24
CYP2D6-inhibitor: 0.002 CYP2D6-substrate: 0.109
CYP3A4-inhibitor: 0.003 CYP3A4-substrate: 0.033

ADMET: Excretion

Clearance (CL): 1.39 Half-life (T1/2): 0.708

ADMET: Toxicity

hERG Blockers: 0.017 Human Hepatotoxicity (H-HT): 0.143
Drug-inuced Liver Injury (DILI): 0.343 AMES Toxicity: 0.111
Rat Oral Acute Toxicity: 0.463 Maximum Recommended Daily Dose: 0.649
Skin Sensitization: 0.315 Carcinogencity: 0.257
Eye Corrosion: 0.003 Eye Irritation: 0.023
Respiratory Toxicity: 0.514
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004772 0.552 D0HR8Z 0.308
ENC004171 0.549 D0H3KI 0.288
ENC004172 0.549 D0D0ZD 0.281
ENC005292 0.467 D0MU9L 0.254
ENC004325 0.436 D06BQU 0.250
ENC004770 0.400 D0H2RI 0.246
ENC002511 0.388 D07NSU 0.246
ENC004326 0.388 D07HZY 0.246
ENC004175 0.380 D04ZTY 0.243
ENC004173 0.380 D05ZYM 0.235
*Note: the compound similarity was calculated by RDKIT.