NPs Basic Information

Name
Cytosporin D
Molecular Formula C19H30O5
IUPAC Name*
(1aS,2R,4aS,7S,8aR)-3-[(E)-hept-1-enyl]-4-(hydroxymethyl)-6,6-dimethyl-2,4a,7,8-tetrahydro-1aH-oxireno[2,3-e]chromene-2,7-diol
SMILES
CCCCC/C=C/C1=C([C@H]2[C@]3(C[C@@H](C(O2)(C)C)O)[C@H]([C@@H]1O)O3)CO
InChI
InChI=1S/C19H30O5/c1-4-5-6-7-8-9-12-13(11-20)16-19(17(24-19)15(12)22)10-14(21)18(2,3)23-16/h8-9,14-17,20-22H,4-7,10-11H2,1-3H3/b9-8+/t14-,15+,16-,17-,19+/m0/s1
InChIKey
BAJVQMTZYHWAMD-UDIPEWIUSA-N
Synonyms
Cytosporin D; CHEMBL4442474; CHEBI:70039; Q27138378; (1aS,2R,4aS,7S,8aR)-3-[(E)-hept-1-enyl]-4-(hydroxymethyl)-6,6-dimethyl-2,4a,7,8-tetrahydro-1aH-oxireno[2,3-e]chromene-2,7-diol
CAS NA
PubChem CID 24882685
ChEMBL ID CHEMBL4442474
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Oxanes
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Oxanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 338.4 ALogp: 0.7
HBD: 3 HBA: 5
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 82.4 Aromatic Rings: 3
Heavy Atoms: 24 QED Weighted: 0.512

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.714 MDCK Permeability: 0.00002340
Pgp-inhibitor: 0.914 Pgp-substrate: 0.89
Human Intestinal Absorption (HIA): 0.018 20% Bioavailability (F20%): 0.468
30% Bioavailability (F30%): 0.435

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.319 Plasma Protein Binding (PPB): 73.11%
Volume Distribution (VD): 1.392 Fu: 29.33%

ADMET: Metabolism

CYP1A2-inhibitor: 0.034 CYP1A2-substrate: 0.085
CYP2C19-inhibitor: 0.022 CYP2C19-substrate: 0.609
CYP2C9-inhibitor: 0.02 CYP2C9-substrate: 0.09
CYP2D6-inhibitor: 0.006 CYP2D6-substrate: 0.187
CYP3A4-inhibitor: 0.037 CYP3A4-substrate: 0.214

ADMET: Excretion

Clearance (CL): 5.833 Half-life (T1/2): 0.58

ADMET: Toxicity

hERG Blockers: 0.014 Human Hepatotoxicity (H-HT): 0.806
Drug-inuced Liver Injury (DILI): 0.901 AMES Toxicity: 0.426
Rat Oral Acute Toxicity: 0.891 Maximum Recommended Daily Dose: 0.97
Skin Sensitization: 0.919 Carcinogencity: 0.725
Eye Corrosion: 0.079 Eye Irritation: 0.623
Respiratory Toxicity: 0.978
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004326 1.000 D0N3NO 0.239
ENC004327 0.787 D06FEA 0.239
ENC003663 0.772 D09SRR 0.237
ENC003598 0.763 D0V0IX 0.236
ENC004330 0.750 D0HR8Z 0.233
ENC002977 0.740 D0H2YX 0.231
ENC004329 0.740 D07PCI 0.227
ENC004325 0.727 D0P1FO 0.226
ENC004324 0.679 D04RGA 0.220
ENC004331 0.671 D04VIS 0.218
*Note: the compound similarity was calculated by RDKIT.