NPs Basic Information

Name
corynesidone B
Molecular Formula C16H12O8
IUPAC Name*
3,8,9-trihydroxy-1,7-dimethyl-6-oxobenzo[b][1,4]benzodioxepine-2-carboxylicacid
SMILES
Cc1c2c(cc(O)c1C(=O)O)OC(=O)c1c(cc(O)c(O)c1C)O2
InChI
InChI=1S/C16H12O8/c1-5-12-9(4-8(18)13(5)19)23-14-6(2)11(15(20)21)7(17)3-10(14)24-16(12)22/h3-4,17-19H,1-2H3,(H,20,21)
InChIKey
KKFIHMPCTYNQNZ-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Depsides and depsidones
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Depsides and depsidones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 332.26 ALogp: 2.4
HBD: 4 HBA: 7
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 133.5 Aromatic Rings: 3
Heavy Atoms: 24 QED Weighted: 0.355

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.746 MDCK Permeability: 0.00001160
Pgp-inhibitor: 0.002 Pgp-substrate: 0.17
Human Intestinal Absorption (HIA): 0.072 20% Bioavailability (F20%): 0.023
30% Bioavailability (F30%): 0.01

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.029 Plasma Protein Binding (PPB): 98.24%
Volume Distribution (VD): 0.335 Fu: 3.62%

ADMET: Metabolism

CYP1A2-inhibitor: 0.154 CYP1A2-substrate: 0.094
CYP2C19-inhibitor: 0.021 CYP2C19-substrate: 0.047
CYP2C9-inhibitor: 0.433 CYP2C9-substrate: 0.068
CYP2D6-inhibitor: 0.018 CYP2D6-substrate: 0.114
CYP3A4-inhibitor: 0.04 CYP3A4-substrate: 0.057

ADMET: Excretion

Clearance (CL): 6.25 Half-life (T1/2): 0.894

ADMET: Toxicity

hERG Blockers: 0.002 Human Hepatotoxicity (H-HT): 0.474
Drug-inuced Liver Injury (DILI): 0.931 AMES Toxicity: 0.057
Rat Oral Acute Toxicity: 0.878 Maximum Recommended Daily Dose: 0.494
Skin Sensitization: 0.768 Carcinogencity: 0.078
Eye Corrosion: 0.005 Eye Irritation: 0.929
Respiratory Toxicity: 0.565
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005959 0.511 D0K8KX 0.278
ENC003313 0.494 D07MGA 0.263
ENC000884 0.457 D04AIT 0.258
ENC002489 0.457 D0AZ8C 0.246
ENC000921 0.457 D0WY9N 0.246
ENC002865 0.457 D07UXP 0.245
ENC001929 0.453 D0Y7PG 0.242
ENC002590 0.451 D00KRE 0.240
ENC000664 0.440 D07JHH 0.240
ENC005447 0.432 D00PEH 0.238
*Note: the compound similarity was calculated by RDKIT.