NPs Basic Information

Name
Citromycetin
Molecular Formula C14H10O7
IUPAC Name*
8,9-dihydroxy-2-methyl-4-oxo-5H-pyrano[3,2-c]chromene-10-carboxylic acid
SMILES
CC1=CC(=O)C2=C(O1)C3=C(C=C(C(=C3C(=O)O)O)O)OC2
InChI
InChI=1S/C14H10O7/c1-5-2-7(15)6-4-20-9-3-8(16)12(17)11(14(18)19)10(9)13(6)21-5/h2-3,16-17H,4H2,1H3,(H,18,19)
InChIKey
PKEPGKZPVDAVKI-UHFFFAOYSA-N
Synonyms
Citromycetin; 478-60-4; Frequentic acid; NSC53584; NSC 53584; NSC-53584; 6LQ9JP1YA7; 8,9-dihydroxy-2-methyl-4-oxo-5H-pyrano[3,2-c]chromene-10-carboxylic acid; 8,9-Dihydroxy-2-methyl-4-oxo-4H,5H-pyrano[3,2-c]chromene-10-carboxylic acid; 4H,5H-Pyrano[3,2-c][1]benzopyran-10-carboxylicacid, 8,9-dihydroxy-2-methyl-4-oxo-; 8,9-Dihydroxy-2-methyl-4-oxo-4H,5H-pyrano[3,2-c][1]benzopyran-10-carboxylic acid; UNII-6LQ9JP1YA7; BRN 0330020; 8,9-DIHYDROXY-2-METHYL-4-OXO-4H,5H-PYRANO(3,2-C)(1)BENZOPYRAN-10-CARBOXYLIC ACID; Spectrum_000290; SpecPlus_000355; Spectrum5_000777; CITROMYCETIN [MI]; KBioSS_000770; 4-19-00-03953 (Beilstein Handbook Reference); DivK1c_006451; SCHEMBL2137852; ZINC1165; ACon1_002335; KBio1_001395; KBio2_000770; KBio2_003338; KBio2_005906; DTXSID60197283; 4H,5H-Pyrano(3,2-c)(1)benzopyran-10-carboxylic acid, 8,9-dihydroxy-2-methyl-4-oxo-; NCGC00169943-01; HY-116479; CS-0065609; Q15410873; 4H,2-c][1]benzopyran-10-carboxylic acid, 8,9-dihydroxy-2-methyl-4-oxo-
CAS 478-60-4
PubChem CID 65029
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Benzenoids
      • Class: Benzene and substituted d
        • Subclass: Benzoic acids and derivat
          • Direct Parent: Salicylic acid and deriva

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 290.22 ALogp: 1.1
HBD: 3 HBA: 7
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 113.0 Aromatic Rings: 3
Heavy Atoms: 21 QED Weighted: 0.689

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.554 MDCK Permeability: 0.00000729
Pgp-inhibitor: 0.001 Pgp-substrate: 0.059
Human Intestinal Absorption (HIA): 0.188 20% Bioavailability (F20%): 0.525
30% Bioavailability (F30%): 0.995

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.029 Plasma Protein Binding (PPB): 88.95%
Volume Distribution (VD): 0.742 Fu: 11.64%

ADMET: Metabolism

CYP1A2-inhibitor: 0.058 CYP1A2-substrate: 0.534
CYP2C19-inhibitor: 0.02 CYP2C19-substrate: 0.051
CYP2C9-inhibitor: 0.09 CYP2C9-substrate: 0.079
CYP2D6-inhibitor: 0.023 CYP2D6-substrate: 0.124
CYP3A4-inhibitor: 0.022 CYP3A4-substrate: 0.043

ADMET: Excretion

Clearance (CL): 1.578 Half-life (T1/2): 0.894

ADMET: Toxicity

hERG Blockers: 0.013 Human Hepatotoxicity (H-HT): 0.532
Drug-inuced Liver Injury (DILI): 0.992 AMES Toxicity: 0.251
Rat Oral Acute Toxicity: 0.094 Maximum Recommended Daily Dose: 0.01
Skin Sensitization: 0.296 Carcinogencity: 0.151
Eye Corrosion: 0.003 Eye Irritation: 0.032
Respiratory Toxicity: 0.531
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001505 0.597 D07UXP 0.279
ENC003632 0.541 D0K8KX 0.272
ENC004733 0.440 D07MGA 0.269
ENC003635 0.432 D04AIT 0.264
ENC003720 0.400 D0Y7PG 0.261
ENC002865 0.398 D0FA2O 0.253
ENC001518 0.386 D06FVX 0.250
ENC000935 0.372 D0G4KG 0.250
ENC003772 0.372 D06GCK 0.248
ENC002811 0.368 D0G5UB 0.245
*Note: the compound similarity was calculated by RDKIT.