NPs Basic Information

Name
Cyophiobiolin A
Molecular Formula C25H38O5
IUPAC Name*
6-(5,6-dihydroxy-6-methylheptan-2-yl)-13-hydroxy-3,15-dimethyl-12-oxatetracyclo[8.5.1.03,7.013,16]hexadeca-5,9-dien-11-one
SMILES
CC(CCC(O)C(C)(C)O)C1=CCC2(C)CC3C(C)CC4(O)OC(=O)C(=CCC12)C34
InChI
InChI=1S/C25H38O5/c1-14(6-9-20(26)23(3,4)28)16-10-11-24(5)13-18-15(2)12-25(29)21(18)17(22(27)30-25)7-8-19(16)24/h7,10,14-15,18-21,26,28-29H,6,8-9,11-13H2,1-5H3/b17-7+/t14-,15+,18+,19+,20-,21+,24-,25-/m1/s1
InChIKey
NUSUANHHDIDGBM-OMQHTPMVSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Terpene lactones
          • Direct Parent: Terpene lactones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 418.57 ALogp: 3.7
HBD: 3 HBA: 5
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 87.0 Aromatic Rings: 4
Heavy Atoms: 30 QED Weighted: 0.455

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.648 MDCK Permeability: 0.00001890
Pgp-inhibitor: 0.806 Pgp-substrate: 0.005
Human Intestinal Absorption (HIA): 0.755 20% Bioavailability (F20%): 0.105
30% Bioavailability (F30%): 0.891

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.91 Plasma Protein Binding (PPB): 91.91%
Volume Distribution (VD): 1.662 Fu: 4.53%

ADMET: Metabolism

CYP1A2-inhibitor: 0.019 CYP1A2-substrate: 0.248
CYP2C19-inhibitor: 0.023 CYP2C19-substrate: 0.736
CYP2C9-inhibitor: 0.124 CYP2C9-substrate: 0.173
CYP2D6-inhibitor: 0.008 CYP2D6-substrate: 0.201
CYP3A4-inhibitor: 0.695 CYP3A4-substrate: 0.334

ADMET: Excretion

Clearance (CL): 13.132 Half-life (T1/2): 0.029

ADMET: Toxicity

hERG Blockers: 0.007 Human Hepatotoxicity (H-HT): 0.166
Drug-inuced Liver Injury (DILI): 0.092 AMES Toxicity: 0.018
Rat Oral Acute Toxicity: 0.844 Maximum Recommended Daily Dose: 0.935
Skin Sensitization: 0.051 Carcinogencity: 0.706
Eye Corrosion: 0.003 Eye Irritation: 0.009
Respiratory Toxicity: 0.954
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004489 0.833 D02ZGI 0.294
ENC004491 0.610 D0T2PL 0.226
ENC003124 0.480 D08PIQ 0.222
ENC003123 0.480 D0I5DS 0.222
ENC004490 0.440 D08SVH 0.216
ENC005046 0.402 D05BTM 0.216
ENC005050 0.368 D0N1TP 0.216
ENC002983 0.333 D0Y7LD 0.215
ENC005047 0.333 D0D2TN 0.213
ENC003211 0.316 D0G6AB 0.212
*Note: the compound similarity was calculated by RDKIT.