NPs Basic Information

Name
(2S,3S,4E)-hepta-4,6-diene-2,3-diol
Molecular Formula C7H12O2
IUPAC Name*
(2R,3R,4E)-hepta-4,6-diene-2,3-diol
SMILES
C[C@H]([C@@H](/C=C/C=C)O)O
InChI
InChI=1S/C7H12O2/c1-3-4-5-7(9)6(2)8/h3-9H,1H2,2H3/b5-4+/t6-,7-/m1/s1
InChIKey
GNWBKRGDJREVRW-XIMOZBJHSA-N
Synonyms
(2S,3S,4E)-hepta-4,6-diene-2,3-diol
CAS NA
PubChem CID 156581778
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty alcohols
          • Direct Parent: Fatty alcohols

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 128.17 ALogp: 0.6
HBD: 2 HBA: 2
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 40.5 Aromatic Rings: 0
Heavy Atoms: 9 QED Weighted: 0.553

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.552 MDCK Permeability: 0.00003950
Pgp-inhibitor: 0 Pgp-substrate: 0.237
Human Intestinal Absorption (HIA): 0.011 20% Bioavailability (F20%): 0.004
30% Bioavailability (F30%): 0.014

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.191 Plasma Protein Binding (PPB): 15.00%
Volume Distribution (VD): 0.839 Fu: 75.55%

ADMET: Metabolism

CYP1A2-inhibitor: 0.078 CYP1A2-substrate: 0.098
CYP2C19-inhibitor: 0.028 CYP2C19-substrate: 0.819
CYP2C9-inhibitor: 0.007 CYP2C9-substrate: 0.945
CYP2D6-inhibitor: 0.007 CYP2D6-substrate: 0.768
CYP3A4-inhibitor: 0.004 CYP3A4-substrate: 0.124

ADMET: Excretion

Clearance (CL): 3.037 Half-life (T1/2): 0.776

ADMET: Toxicity

hERG Blockers: 0.008 Human Hepatotoxicity (H-HT): 0.209
Drug-inuced Liver Injury (DILI): 0.441 AMES Toxicity: 0.571
Rat Oral Acute Toxicity: 0.637 Maximum Recommended Daily Dose: 0.019
Skin Sensitization: 0.693 Carcinogencity: 0.527
Eye Corrosion: 0.537 Eye Irritation: 0.984
Respiratory Toxicity: 0.875
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005823 0.429 D08QGD 0.194
ENC005818 0.429 D00ZOF 0.156
ENC005819 0.429 D02OAV 0.152
ENC005822 0.429 D0Q9YT 0.150
ENC001709 0.412 D04EYC 0.146
ENC005820 0.409 D0S2IQ 0.145
ENC005821 0.409 D05ZTH 0.145
ENC005840 0.333 D0X2MB 0.134
ENC001011 0.333 D0N3NO 0.128
ENC000016 0.333 D01QUS 0.128
*Note: the compound similarity was calculated by RDKIT.